scSSA -- A clustering method for single cell RNA-Seq data based on semi-supervised autoencoder

Requirements:

Python --- 3.6.8

pytorch -- 1.5.1

Scanpy --- 1.0.4

scikit-learn --- 0.24

numpy --- 1.19

pandas --- 1.0

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
Evaluation index.py		Evaluation index.py
FastICA.py		FastICA.py
GaussianMixture clustering.py		GaussianMixture clustering.py
Preprocessing.py		Preprocessing.py
README.md		README.md
autorun.py		autorun.py
biase_celldata.csv		biase_celldata.csv
biase_data.csv		biase_data.csv
biase_genedata.csv		biase_genedata.csv
log_zinb_positive.py		log_zinb_positive.py
scSSA_exampledata_biase.py		scSSA_exampledata_biase.py
semi_Autoencoder.py		semi_Autoencoder.py
visi.py		visi.py

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