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Speed up batched PyTorch DataLoader #5512

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merged 7 commits into from
Feb 19, 2023
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@lhoestq lhoestq commented Feb 8, 2023

I implemented __getitems__ to speed up batched data loading in PyTorch

close #5505

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HuggingFaceDocBuilderDev commented Feb 8, 2023

The documentation is not available anymore as the PR was closed or merged.

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Show benchmarks

PyArrow==6.0.0

Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.008882 / 0.011353 (-0.002471) 0.004562 / 0.011008 (-0.006446) 0.100035 / 0.038508 (0.061527) 0.030654 / 0.023109 (0.007545) 0.298745 / 0.275898 (0.022847) 0.356869 / 0.323480 (0.033389) 0.007170 / 0.007986 (-0.000815) 0.003471 / 0.004328 (-0.000858) 0.077975 / 0.004250 (0.073725) 0.037861 / 0.037052 (0.000809) 0.311643 / 0.258489 (0.053154) 0.343504 / 0.293841 (0.049663) 0.033768 / 0.128546 (-0.094778) 0.011342 / 0.075646 (-0.064304) 0.323953 / 0.419271 (-0.095319) 0.040818 / 0.043533 (-0.002715) 0.298492 / 0.255139 (0.043353) 0.327292 / 0.283200 (0.044092) 0.088423 / 0.141683 (-0.053260) 1.489520 / 1.452155 (0.037366) 1.532962 / 1.492716 (0.040245)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.223654 / 0.018006 (0.205647) 0.415134 / 0.000490 (0.414644) 0.007394 / 0.000200 (0.007194) 0.000080 / 0.000054 (0.000026)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.023616 / 0.037411 (-0.013795) 0.096652 / 0.014526 (0.082126) 0.105239 / 0.176557 (-0.071318) 0.148637 / 0.737135 (-0.588498) 0.107937 / 0.296338 (-0.188402)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.426816 / 0.215209 (0.211607) 4.241533 / 2.077655 (2.163878) 1.946493 / 1.504120 (0.442373) 1.735765 / 1.541195 (0.194570) 1.781424 / 1.468490 (0.312934) 0.688082 / 4.584777 (-3.896694) 3.396444 / 3.745712 (-0.349268) 1.920333 / 5.269862 (-3.349528) 1.293833 / 4.565676 (-3.271843) 0.081967 / 0.424275 (-0.342308) 0.012911 / 0.007607 (0.005304) 0.536928 / 0.226044 (0.310884) 5.452327 / 2.268929 (3.183399) 2.505785 / 55.444624 (-52.938840) 2.173627 / 6.876477 (-4.702850) 2.119978 / 2.142072 (-0.022095) 0.809012 / 4.805227 (-3.996215) 0.149124 / 6.500664 (-6.351540) 0.066008 / 0.075469 (-0.009461)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.215702 / 1.841788 (-0.626085) 13.757525 / 8.074308 (5.683217) 13.999208 / 10.191392 (3.807816) 0.164875 / 0.680424 (-0.515549) 0.028517 / 0.534201 (-0.505684) 0.394829 / 0.579283 (-0.184454) 0.404962 / 0.434364 (-0.029401) 0.484455 / 0.540337 (-0.055882) 0.575008 / 1.386936 (-0.811928)
PyArrow==latest
Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.006754 / 0.011353 (-0.004598) 0.004579 / 0.011008 (-0.006430) 0.076617 / 0.038508 (0.038109) 0.027902 / 0.023109 (0.004793) 0.346278 / 0.275898 (0.070380) 0.398060 / 0.323480 (0.074580) 0.004938 / 0.007986 (-0.003047) 0.004681 / 0.004328 (0.000353) 0.076336 / 0.004250 (0.072086) 0.038018 / 0.037052 (0.000966) 0.358701 / 0.258489 (0.100212) 0.408413 / 0.293841 (0.114572) 0.031772 / 0.128546 (-0.096774) 0.011604 / 0.075646 (-0.064042) 0.085964 / 0.419271 (-0.333308) 0.042030 / 0.043533 (-0.001502) 0.343568 / 0.255139 (0.088429) 0.381805 / 0.283200 (0.098605) 0.090759 / 0.141683 (-0.050924) 1.504553 / 1.452155 (0.052398) 1.594006 / 1.492716 (0.101289)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.227395 / 0.018006 (0.209389) 0.403097 / 0.000490 (0.402608) 0.000413 / 0.000200 (0.000213) 0.000060 / 0.000054 (0.000006)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.024693 / 0.037411 (-0.012718) 0.100470 / 0.014526 (0.085944) 0.108481 / 0.176557 (-0.068076) 0.142791 / 0.737135 (-0.594345) 0.109949 / 0.296338 (-0.186389)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.443674 / 0.215209 (0.228465) 4.412207 / 2.077655 (2.334553) 2.073752 / 1.504120 (0.569632) 1.863153 / 1.541195 (0.321958) 1.940063 / 1.468490 (0.471573) 0.696456 / 4.584777 (-3.888321) 3.422120 / 3.745712 (-0.323592) 1.902579 / 5.269862 (-3.367282) 1.184948 / 4.565676 (-3.380729) 0.083079 / 0.424275 (-0.341196) 0.012649 / 0.007607 (0.005042) 0.542035 / 0.226044 (0.315991) 5.421826 / 2.268929 (3.152897) 2.525092 / 55.444624 (-52.919532) 2.177144 / 6.876477 (-4.699332) 2.225224 / 2.142072 (0.083151) 0.804739 / 4.805227 (-4.000488) 0.151000 / 6.500664 (-6.349664) 0.066987 / 0.075469 (-0.008482)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.277199 / 1.841788 (-0.564589) 14.184146 / 8.074308 (6.109838) 13.413348 / 10.191392 (3.221956) 0.128551 / 0.680424 (-0.551872) 0.016461 / 0.534201 (-0.517740) 0.379963 / 0.579283 (-0.199320) 0.381350 / 0.434364 (-0.053014) 0.439044 / 0.540337 (-0.101293) 0.521559 / 1.386936 (-0.865377)

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Show benchmarks

PyArrow==6.0.0

Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.008876 / 0.011353 (-0.002477) 0.004629 / 0.011008 (-0.006379) 0.101697 / 0.038508 (0.063189) 0.030373 / 0.023109 (0.007264) 0.302206 / 0.275898 (0.026308) 0.365835 / 0.323480 (0.042355) 0.007877 / 0.007986 (-0.000109) 0.004473 / 0.004328 (0.000144) 0.077334 / 0.004250 (0.073084) 0.038066 / 0.037052 (0.001014) 0.308064 / 0.258489 (0.049575) 0.347329 / 0.293841 (0.053488) 0.034478 / 0.128546 (-0.094068) 0.011651 / 0.075646 (-0.063995) 0.323481 / 0.419271 (-0.095791) 0.043515 / 0.043533 (-0.000018) 0.299885 / 0.255139 (0.044746) 0.328959 / 0.283200 (0.045760) 0.095308 / 0.141683 (-0.046375) 1.474058 / 1.452155 (0.021903) 1.535335 / 1.492716 (0.042619)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.197416 / 0.018006 (0.179410) 0.421935 / 0.000490 (0.421446) 0.003490 / 0.000200 (0.003290) 0.000074 / 0.000054 (0.000020)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.024519 / 0.037411 (-0.012892) 0.100710 / 0.014526 (0.086185) 0.104520 / 0.176557 (-0.072036) 0.142048 / 0.737135 (-0.595087) 0.109274 / 0.296338 (-0.187064)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.408766 / 0.215209 (0.193557) 4.101720 / 2.077655 (2.024065) 1.812375 / 1.504120 (0.308256) 1.605819 / 1.541195 (0.064624) 1.688923 / 1.468490 (0.220433) 0.691198 / 4.584777 (-3.893579) 3.422137 / 3.745712 (-0.323575) 1.921318 / 5.269862 (-3.348544) 1.168770 / 4.565676 (-3.396906) 0.082840 / 0.424275 (-0.341435) 0.012740 / 0.007607 (0.005133) 0.524333 / 0.226044 (0.298289) 5.258077 / 2.268929 (2.989149) 2.273177 / 55.444624 (-53.171447) 1.931919 / 6.876477 (-4.944558) 1.988415 / 2.142072 (-0.153658) 0.812227 / 4.805227 (-3.993000) 0.150043 / 6.500664 (-6.350622) 0.066422 / 0.075469 (-0.009047)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.188069 / 1.841788 (-0.653718) 13.942681 / 8.074308 (5.868373) 14.104658 / 10.191392 (3.913266) 0.151966 / 0.680424 (-0.528458) 0.028833 / 0.534201 (-0.505368) 0.395125 / 0.579283 (-0.184158) 0.408512 / 0.434364 (-0.025852) 0.487587 / 0.540337 (-0.052751) 0.570023 / 1.386936 (-0.816913)
PyArrow==latest
Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.006860 / 0.011353 (-0.004493) 0.004582 / 0.011008 (-0.006426) 0.079902 / 0.038508 (0.041394) 0.027565 / 0.023109 (0.004456) 0.341393 / 0.275898 (0.065495) 0.378911 / 0.323480 (0.055431) 0.005847 / 0.007986 (-0.002138) 0.004681 / 0.004328 (0.000353) 0.079422 / 0.004250 (0.075171) 0.039135 / 0.037052 (0.002083) 0.342026 / 0.258489 (0.083537) 0.387510 / 0.293841 (0.093669) 0.031999 / 0.128546 (-0.096547) 0.011782 / 0.075646 (-0.063865) 0.088563 / 0.419271 (-0.330709) 0.042435 / 0.043533 (-0.001098) 0.343055 / 0.255139 (0.087916) 0.367437 / 0.283200 (0.084237) 0.091578 / 0.141683 (-0.050104) 1.506828 / 1.452155 (0.054673) 1.599590 / 1.492716 (0.106874)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.217939 / 0.018006 (0.199932) 0.408352 / 0.000490 (0.407863) 0.000394 / 0.000200 (0.000194) 0.000063 / 0.000054 (0.000009)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.026344 / 0.037411 (-0.011067) 0.102968 / 0.014526 (0.088442) 0.110340 / 0.176557 (-0.066217) 0.145696 / 0.737135 (-0.591439) 0.111632 / 0.296338 (-0.184707)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.440764 / 0.215209 (0.225555) 4.423179 / 2.077655 (2.345524) 2.057016 / 1.504120 (0.552896) 1.848741 / 1.541195 (0.307546) 1.939827 / 1.468490 (0.471337) 0.699370 / 4.584777 (-3.885407) 3.472521 / 3.745712 (-0.273191) 3.232557 / 5.269862 (-2.037305) 1.755534 / 4.565676 (-2.810143) 0.083469 / 0.424275 (-0.340807) 0.012980 / 0.007607 (0.005373) 0.557662 / 0.226044 (0.331618) 5.435657 / 2.268929 (3.166729) 2.545106 / 55.444624 (-52.899519) 2.168047 / 6.876477 (-4.708430) 2.234070 / 2.142072 (0.091997) 0.804662 / 4.805227 (-4.000565) 0.152832 / 6.500664 (-6.347833) 0.069372 / 0.075469 (-0.006097)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.299189 / 1.841788 (-0.542598) 14.752880 / 8.074308 (6.678572) 13.607676 / 10.191392 (3.416284) 0.150773 / 0.680424 (-0.529650) 0.016701 / 0.534201 (-0.517500) 0.379507 / 0.579283 (-0.199776) 0.389401 / 0.434364 (-0.044963) 0.444199 / 0.540337 (-0.096139) 0.524264 / 1.386936 (-0.862672)

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Show benchmarks

PyArrow==6.0.0

Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.008694 / 0.011353 (-0.002659) 0.004549 / 0.011008 (-0.006459) 0.101164 / 0.038508 (0.062656) 0.029644 / 0.023109 (0.006535) 0.294849 / 0.275898 (0.018950) 0.366755 / 0.323480 (0.043275) 0.007205 / 0.007986 (-0.000780) 0.004255 / 0.004328 (-0.000074) 0.077433 / 0.004250 (0.073183) 0.038024 / 0.037052 (0.000972) 0.310380 / 0.258489 (0.051891) 0.347093 / 0.293841 (0.053252) 0.033232 / 0.128546 (-0.095314) 0.011404 / 0.075646 (-0.064242) 0.323341 / 0.419271 (-0.095930) 0.040586 / 0.043533 (-0.002946) 0.296083 / 0.255139 (0.040944) 0.321870 / 0.283200 (0.038671) 0.087377 / 0.141683 (-0.054306) 1.466869 / 1.452155 (0.014715) 1.514763 / 1.492716 (0.022046)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.010272 / 0.018006 (-0.007734) 0.414645 / 0.000490 (0.414155) 0.003730 / 0.000200 (0.003530) 0.000076 / 0.000054 (0.000021)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.024093 / 0.037411 (-0.013318) 0.098718 / 0.014526 (0.084192) 0.105526 / 0.176557 (-0.071030) 0.141578 / 0.737135 (-0.595557) 0.109679 / 0.296338 (-0.186660)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.412907 / 0.215209 (0.197698) 4.134934 / 2.077655 (2.057280) 1.881180 / 1.504120 (0.377060) 1.693207 / 1.541195 (0.152012) 1.753725 / 1.468490 (0.285235) 0.693077 / 4.584777 (-3.891700) 3.367409 / 3.745712 (-0.378303) 2.749035 / 5.269862 (-2.520827) 1.565015 / 4.565676 (-3.000662) 0.082609 / 0.424275 (-0.341666) 0.012500 / 0.007607 (0.004892) 0.523619 / 0.226044 (0.297575) 5.250188 / 2.268929 (2.981259) 2.314255 / 55.444624 (-53.130369) 1.962357 / 6.876477 (-4.914120) 2.020632 / 2.142072 (-0.121441) 0.812504 / 4.805227 (-3.992724) 0.149921 / 6.500664 (-6.350743) 0.065816 / 0.075469 (-0.009653)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.230811 / 1.841788 (-0.610977) 14.008566 / 8.074308 (5.934258) 14.371285 / 10.191392 (4.179893) 0.166323 / 0.680424 (-0.514101) 0.029702 / 0.534201 (-0.504499) 0.408629 / 0.579283 (-0.170654) 0.410529 / 0.434364 (-0.023835) 0.484482 / 0.540337 (-0.055855) 0.572360 / 1.386936 (-0.814576)
PyArrow==latest
Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.006873 / 0.011353 (-0.004480) 0.004609 / 0.011008 (-0.006400) 0.075492 / 0.038508 (0.036984) 0.028560 / 0.023109 (0.005450) 0.340321 / 0.275898 (0.064423) 0.376758 / 0.323480 (0.053278) 0.005271 / 0.007986 (-0.002715) 0.004786 / 0.004328 (0.000457) 0.074843 / 0.004250 (0.070592) 0.041072 / 0.037052 (0.004019) 0.339952 / 0.258489 (0.081463) 0.384375 / 0.293841 (0.090534) 0.031771 / 0.128546 (-0.096775) 0.011607 / 0.075646 (-0.064039) 0.084338 / 0.419271 (-0.334933) 0.042251 / 0.043533 (-0.001282) 0.338904 / 0.255139 (0.083765) 0.365360 / 0.283200 (0.082160) 0.093151 / 0.141683 (-0.048532) 1.449833 / 1.452155 (-0.002322) 1.601946 / 1.492716 (0.109229)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.225149 / 0.018006 (0.207142) 0.409855 / 0.000490 (0.409365) 0.000384 / 0.000200 (0.000184) 0.000060 / 0.000054 (0.000006)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.025914 / 0.037411 (-0.011497) 0.100443 / 0.014526 (0.085917) 0.108557 / 0.176557 (-0.067999) 0.150338 / 0.737135 (-0.586798) 0.111472 / 0.296338 (-0.184866)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.440221 / 0.215209 (0.225012) 4.409268 / 2.077655 (2.331613) 2.096008 / 1.504120 (0.591888) 1.849443 / 1.541195 (0.308248) 1.934901 / 1.468490 (0.466410) 0.704072 / 4.584777 (-3.880705) 3.371370 / 3.745712 (-0.374343) 3.185478 / 5.269862 (-2.084384) 1.514541 / 4.565676 (-3.051135) 0.083724 / 0.424275 (-0.340551) 0.012674 / 0.007607 (0.005067) 0.542155 / 0.226044 (0.316111) 5.413456 / 2.268929 (3.144528) 2.508567 / 55.444624 (-52.936057) 2.163235 / 6.876477 (-4.713242) 2.193914 / 2.142072 (0.051842) 0.810955 / 4.805227 (-3.994272) 0.152769 / 6.500664 (-6.347895) 0.068009 / 0.075469 (-0.007460)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.272511 / 1.841788 (-0.569276) 14.334861 / 8.074308 (6.260553) 13.555445 / 10.191392 (3.364053) 0.160520 / 0.680424 (-0.519904) 0.018363 / 0.534201 (-0.515838) 0.384937 / 0.579283 (-0.194346) 0.409138 / 0.434364 (-0.025225) 0.484037 / 0.540337 (-0.056300) 0.565595 / 1.386936 (-0.821341)

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Show benchmarks

PyArrow==6.0.0

Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.010077 / 0.011353 (-0.001276) 0.005650 / 0.011008 (-0.005359) 0.101285 / 0.038508 (0.062777) 0.039571 / 0.023109 (0.016462) 0.291855 / 0.275898 (0.015957) 0.363582 / 0.323480 (0.040102) 0.008513 / 0.007986 (0.000527) 0.004472 / 0.004328 (0.000144) 0.077314 / 0.004250 (0.073064) 0.050707 / 0.037052 (0.013654) 0.317282 / 0.258489 (0.058792) 0.342348 / 0.293841 (0.048507) 0.042951 / 0.128546 (-0.085595) 0.012295 / 0.075646 (-0.063351) 0.337269 / 0.419271 (-0.082003) 0.048953 / 0.043533 (0.005420) 0.292547 / 0.255139 (0.037408) 0.325436 / 0.283200 (0.042236) 0.111859 / 0.141683 (-0.029824) 1.501958 / 1.452155 (0.049804) 1.522281 / 1.492716 (0.029565)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.011775 / 0.018006 (-0.006231) 0.513283 / 0.000490 (0.512793) 0.002941 / 0.000200 (0.002741) 0.000099 / 0.000054 (0.000044)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.028702 / 0.037411 (-0.008710) 0.108465 / 0.014526 (0.093940) 0.121806 / 0.176557 (-0.054750) 0.158424 / 0.737135 (-0.578712) 0.128077 / 0.296338 (-0.168262)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.395392 / 0.215209 (0.180183) 3.944138 / 2.077655 (1.866483) 1.773698 / 1.504120 (0.269578) 1.588907 / 1.541195 (0.047712) 1.697794 / 1.468490 (0.229304) 0.690281 / 4.584777 (-3.894496) 3.819661 / 3.745712 (0.073948) 3.228006 / 5.269862 (-2.041856) 1.755625 / 4.565676 (-2.810052) 0.083169 / 0.424275 (-0.341106) 0.012337 / 0.007607 (0.004730) 0.504730 / 0.226044 (0.278686) 5.016916 / 2.268929 (2.747988) 2.245484 / 55.444624 (-53.199141) 1.911682 / 6.876477 (-4.964795) 1.957659 / 2.142072 (-0.184413) 0.818361 / 4.805227 (-3.986866) 0.162386 / 6.500664 (-6.338279) 0.062461 / 0.075469 (-0.013008)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.197654 / 1.841788 (-0.644134) 15.465611 / 8.074308 (7.391303) 14.409126 / 10.191392 (4.217734) 0.171776 / 0.680424 (-0.508647) 0.028749 / 0.534201 (-0.505452) 0.439666 / 0.579283 (-0.139618) 0.445159 / 0.434364 (0.010795) 0.543992 / 0.540337 (0.003655) 0.643911 / 1.386936 (-0.743025)
PyArrow==latest
Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.007036 / 0.011353 (-0.004317) 0.005273 / 0.011008 (-0.005735) 0.075314 / 0.038508 (0.036806) 0.033075 / 0.023109 (0.009966) 0.350133 / 0.275898 (0.074235) 0.399366 / 0.323480 (0.075886) 0.005945 / 0.007986 (-0.002041) 0.004276 / 0.004328 (-0.000052) 0.074975 / 0.004250 (0.070725) 0.051758 / 0.037052 (0.014706) 0.355077 / 0.258489 (0.096588) 0.430296 / 0.293841 (0.136455) 0.036257 / 0.128546 (-0.092290) 0.012376 / 0.075646 (-0.063270) 0.087441 / 0.419271 (-0.331830) 0.049066 / 0.043533 (0.005534) 0.339867 / 0.255139 (0.084728) 0.384379 / 0.283200 (0.101179) 0.104843 / 0.141683 (-0.036840) 1.498897 / 1.452155 (0.046742) 1.551400 / 1.492716 (0.058684)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.334504 / 0.018006 (0.316498) 0.516551 / 0.000490 (0.516061) 0.000450 / 0.000200 (0.000250) 0.000057 / 0.000054 (0.000003)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.029313 / 0.037411 (-0.008099) 0.110667 / 0.014526 (0.096141) 0.124001 / 0.176557 (-0.052556) 0.159154 / 0.737135 (-0.577981) 0.129503 / 0.296338 (-0.166836)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.416749 / 0.215209 (0.201540) 4.171163 / 2.077655 (2.093508) 1.981071 / 1.504120 (0.476951) 1.788303 / 1.541195 (0.247108) 1.912118 / 1.468490 (0.443628) 0.708764 / 4.584777 (-3.876013) 3.815222 / 3.745712 (0.069510) 2.121633 / 5.269862 (-3.148229) 1.347866 / 4.565676 (-3.217811) 0.086340 / 0.424275 (-0.337935) 0.012646 / 0.007607 (0.005039) 0.525286 / 0.226044 (0.299241) 5.254922 / 2.268929 (2.985994) 2.488743 / 55.444624 (-52.955881) 2.128069 / 6.876477 (-4.748408) 2.180358 / 2.142072 (0.038286) 0.841011 / 4.805227 (-3.964216) 0.168732 / 6.500664 (-6.331932) 0.065559 / 0.075469 (-0.009910)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.270518 / 1.841788 (-0.571270) 15.557563 / 8.074308 (7.483255) 13.660757 / 10.191392 (3.469365) 0.185636 / 0.680424 (-0.494788) 0.018152 / 0.534201 (-0.516049) 0.423553 / 0.579283 (-0.155730) 0.412718 / 0.434364 (-0.021646) 0.528455 / 0.540337 (-0.011882) 0.635274 / 1.386936 (-0.751662)

@lhoestq lhoestq marked this pull request as draft February 8, 2023 16:06
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Show benchmarks

PyArrow==6.0.0

Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.011194 / 0.011353 (-0.000159) 0.006344 / 0.011008 (-0.004664) 0.122013 / 0.038508 (0.083505) 0.044323 / 0.023109 (0.021214) 0.356665 / 0.275898 (0.080767) 0.439871 / 0.323480 (0.116391) 0.010694 / 0.007986 (0.002709) 0.004648 / 0.004328 (0.000320) 0.091140 / 0.004250 (0.086890) 0.052457 / 0.037052 (0.015404) 0.369282 / 0.258489 (0.110793) 0.403279 / 0.293841 (0.109438) 0.054075 / 0.128546 (-0.074472) 0.014484 / 0.075646 (-0.061162) 0.407932 / 0.419271 (-0.011340) 0.060681 / 0.043533 (0.017148) 0.350889 / 0.255139 (0.095750) 0.392041 / 0.283200 (0.108841) 0.121252 / 0.141683 (-0.020431) 1.809527 / 1.452155 (0.357373) 1.835141 / 1.492716 (0.342425)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.227372 / 0.018006 (0.209366) 0.481908 / 0.000490 (0.481418) 0.007262 / 0.000200 (0.007062) 0.000148 / 0.000054 (0.000093)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.031039 / 0.037411 (-0.006372) 0.133947 / 0.014526 (0.119421) 0.141935 / 0.176557 (-0.034622) 0.197854 / 0.737135 (-0.539281) 0.152393 / 0.296338 (-0.143945)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.517400 / 0.215209 (0.302191) 4.899972 / 2.077655 (2.822317) 2.171023 / 1.504120 (0.666903) 2.008706 / 1.541195 (0.467511) 1.988777 / 1.468490 (0.520287) 0.859872 / 4.584777 (-3.724905) 4.673923 / 3.745712 (0.928211) 2.703189 / 5.269862 (-2.566672) 1.891680 / 4.565676 (-2.673997) 0.109601 / 0.424275 (-0.314674) 0.014622 / 0.007607 (0.007015) 0.618990 / 0.226044 (0.392946) 6.255608 / 2.268929 (3.986679) 2.822199 / 55.444624 (-52.622425) 2.457684 / 6.876477 (-4.418793) 2.500041 / 2.142072 (0.357968) 1.054529 / 4.805227 (-3.750698) 0.209501 / 6.500664 (-6.291163) 0.074929 / 0.075469 (-0.000540)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.532780 / 1.841788 (-0.309008) 19.159455 / 8.074308 (11.085147) 17.817063 / 10.191392 (7.625671) 0.194078 / 0.680424 (-0.486346) 0.038211 / 0.534201 (-0.495990) 0.537366 / 0.579283 (-0.041917) 0.538995 / 0.434364 (0.104631) 0.679431 / 0.540337 (0.139094) 0.801960 / 1.386936 (-0.584976)
PyArrow==latest
Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.008729 / 0.011353 (-0.002624) 0.005711 / 0.011008 (-0.005297) 0.091570 / 0.038508 (0.053062) 0.039805 / 0.023109 (0.016696) 0.413507 / 0.275898 (0.137609) 0.456342 / 0.323480 (0.132862) 0.006201 / 0.007986 (-0.001785) 0.009700 / 0.004328 (0.005372) 0.089146 / 0.004250 (0.084896) 0.057543 / 0.037052 (0.020490) 0.420806 / 0.258489 (0.162317) 0.471962 / 0.293841 (0.178121) 0.043940 / 0.128546 (-0.084606) 0.014457 / 0.075646 (-0.061190) 0.106674 / 0.419271 (-0.312598) 0.058930 / 0.043533 (0.015397) 0.419111 / 0.255139 (0.163972) 0.452974 / 0.283200 (0.169774) 0.124573 / 0.141683 (-0.017110) 1.864753 / 1.452155 (0.412599) 1.935387 / 1.492716 (0.442670)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.275657 / 0.018006 (0.257651) 0.498096 / 0.000490 (0.497606) 0.000480 / 0.000200 (0.000280) 0.000066 / 0.000054 (0.000012)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.034377 / 0.037411 (-0.003035) 0.138050 / 0.014526 (0.123524) 0.153718 / 0.176557 (-0.022838) 0.201445 / 0.737135 (-0.535690) 0.160346 / 0.296338 (-0.135992)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.540670 / 0.215209 (0.325461) 5.376291 / 2.077655 (3.298636) 2.581799 / 1.504120 (1.077679) 2.328858 / 1.541195 (0.787663) 2.446458 / 1.468490 (0.977968) 0.923005 / 4.584777 (-3.661772) 4.815977 / 3.745712 (1.070265) 4.205725 / 5.269862 (-1.064137) 2.400466 / 4.565676 (-2.165211) 0.107207 / 0.424275 (-0.317068) 0.015427 / 0.007607 (0.007819) 0.657267 / 0.226044 (0.431222) 6.491256 / 2.268929 (4.222327) 3.179099 / 55.444624 (-52.265525) 2.722434 / 6.876477 (-4.154042) 2.788202 / 2.142072 (0.646129) 1.060016 / 4.805227 (-3.745211) 0.206899 / 6.500664 (-6.293766) 0.077868 / 0.075469 (0.002399)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.567894 / 1.841788 (-0.273893) 19.314330 / 8.074308 (11.240022) 17.597614 / 10.191392 (7.406222) 0.195777 / 0.680424 (-0.484647) 0.022160 / 0.534201 (-0.512041) 0.530592 / 0.579283 (-0.048691) 0.508591 / 0.434364 (0.074227) 0.619794 / 0.540337 (0.079457) 0.749773 / 1.386936 (-0.637163)

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Show benchmarks

PyArrow==6.0.0

Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.012431 / 0.011353 (0.001078) 0.006526 / 0.011008 (-0.004482) 0.132266 / 0.038508 (0.093757) 0.043199 / 0.023109 (0.020089) 0.405230 / 0.275898 (0.129332) 0.494643 / 0.323480 (0.171163) 0.009927 / 0.007986 (0.001941) 0.005227 / 0.004328 (0.000899) 0.110914 / 0.004250 (0.106664) 0.047815 / 0.037052 (0.010763) 0.419099 / 0.258489 (0.160610) 0.463405 / 0.293841 (0.169564) 0.057858 / 0.128546 (-0.070688) 0.018918 / 0.075646 (-0.056728) 0.450584 / 0.419271 (0.031313) 0.060457 / 0.043533 (0.016924) 0.408234 / 0.255139 (0.153095) 0.433722 / 0.283200 (0.150523) 0.119403 / 0.141683 (-0.022280) 1.966742 / 1.452155 (0.514587) 1.980685 / 1.492716 (0.487969)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.292853 / 0.018006 (0.274847) 0.619697 / 0.000490 (0.619207) 0.002135 / 0.000200 (0.001935) 0.000117 / 0.000054 (0.000062)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.031283 / 0.037411 (-0.006129) 0.128649 / 0.014526 (0.114123) 0.150116 / 0.176557 (-0.026441) 0.187605 / 0.737135 (-0.549530) 0.153334 / 0.296338 (-0.143005)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.659660 / 0.215209 (0.444451) 6.459749 / 2.077655 (4.382094) 2.764566 / 1.504120 (1.260446) 2.362630 / 1.541195 (0.821435) 2.426421 / 1.468490 (0.957931) 1.282407 / 4.584777 (-3.302370) 5.668865 / 3.745712 (1.923153) 3.236255 / 5.269862 (-2.033606) 2.248836 / 4.565676 (-2.316841) 0.145861 / 0.424275 (-0.278414) 0.015707 / 0.007607 (0.008100) 0.805218 / 0.226044 (0.579174) 8.146831 / 2.268929 (5.877903) 3.506283 / 55.444624 (-51.938341) 2.736682 / 6.876477 (-4.139795) 2.959039 / 2.142072 (0.816967) 1.528428 / 4.805227 (-3.276799) 0.270980 / 6.500664 (-6.229684) 0.086824 / 0.075469 (0.011355)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.682506 / 1.841788 (-0.159282) 18.844103 / 8.074308 (10.769795) 21.008471 / 10.191392 (10.817079) 0.258372 / 0.680424 (-0.422052) 0.046505 / 0.534201 (-0.487696) 0.574760 / 0.579283 (-0.004523) 0.663745 / 0.434364 (0.229381) 0.702411 / 0.540337 (0.162074) 0.824024 / 1.386936 (-0.562912)
PyArrow==latest
Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.010016 / 0.011353 (-0.001337) 0.007459 / 0.011008 (-0.003549) 0.103954 / 0.038508 (0.065446) 0.036363 / 0.023109 (0.013254) 0.464079 / 0.275898 (0.188181) 0.504730 / 0.323480 (0.181250) 0.007865 / 0.007986 (-0.000121) 0.005210 / 0.004328 (0.000882) 0.105018 / 0.004250 (0.100767) 0.062191 / 0.037052 (0.025139) 0.483304 / 0.258489 (0.224815) 0.547030 / 0.293841 (0.253189) 0.055436 / 0.128546 (-0.073110) 0.021073 / 0.075646 (-0.054573) 0.120952 / 0.419271 (-0.298319) 0.075593 / 0.043533 (0.032060) 0.459930 / 0.255139 (0.204791) 0.486924 / 0.283200 (0.203724) 0.129465 / 0.141683 (-0.012218) 1.902322 / 1.452155 (0.450167) 1.980809 / 1.492716 (0.488092)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.259263 / 0.018006 (0.241257) 0.596703 / 0.000490 (0.596213) 0.004520 / 0.000200 (0.004320) 0.000124 / 0.000054 (0.000070)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.032802 / 0.037411 (-0.004609) 0.138751 / 0.014526 (0.124225) 0.147106 / 0.176557 (-0.029451) 0.194791 / 0.737135 (-0.542345) 0.152643 / 0.296338 (-0.143696)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.678455 / 0.215209 (0.463246) 6.673643 / 2.077655 (4.595989) 2.943368 / 1.504120 (1.439248) 2.591223 / 1.541195 (1.050029) 2.741097 / 1.468490 (1.272607) 1.261178 / 4.584777 (-3.323599) 5.773853 / 3.745712 (2.028141) 3.171559 / 5.269862 (-2.098303) 2.124898 / 4.565676 (-2.440779) 0.161849 / 0.424275 (-0.262426) 0.015498 / 0.007607 (0.007891) 0.857984 / 0.226044 (0.631940) 8.456946 / 2.268929 (6.188018) 3.818787 / 55.444624 (-51.625837) 3.009953 / 6.876477 (-3.866523) 3.113006 / 2.142072 (0.970934) 1.477299 / 4.805227 (-3.327929) 0.267207 / 6.500664 (-6.233457) 0.087590 / 0.075469 (0.012121)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.757389 / 1.841788 (-0.084398) 19.287690 / 8.074308 (11.213381) 21.601991 / 10.191392 (11.410599) 0.260464 / 0.680424 (-0.419960) 0.028552 / 0.534201 (-0.505649) 0.558934 / 0.579283 (-0.020349) 0.673651 / 0.434364 (0.239287) 0.714448 / 0.540337 (0.174111) 0.857608 / 1.386936 (-0.529328)

@lhoestq lhoestq marked this pull request as ready for review February 9, 2023 16:27
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lhoestq commented Feb 9, 2023

Ready for review @mariosasko, LMKWYT :)

Sorry it tooks me a few tries to fix the CI - I ended up not trying to use the latest torch version in the CI.

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Thanks!

tests/test_arrow_dataset.py Outdated Show resolved Hide resolved
Co-authored-by: Mario Šaško <mariosasko777@gmail.com>
@lhoestq lhoestq merged commit f401758 into main Feb 19, 2023
@lhoestq lhoestq deleted the speed-up-batched-dataloader branch February 19, 2023 18:27
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Show benchmarks

PyArrow==6.0.0

Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.009474 / 0.011353 (-0.001878) 0.005507 / 0.011008 (-0.005501) 0.101219 / 0.038508 (0.062711) 0.035591 / 0.023109 (0.012481) 0.305841 / 0.275898 (0.029943) 0.339135 / 0.323480 (0.015656) 0.007920 / 0.007986 (-0.000066) 0.004252 / 0.004328 (-0.000077) 0.076912 / 0.004250 (0.072662) 0.041923 / 0.037052 (0.004871) 0.301405 / 0.258489 (0.042916) 0.356488 / 0.293841 (0.062647) 0.039342 / 0.128546 (-0.089204) 0.012711 / 0.075646 (-0.062935) 0.334193 / 0.419271 (-0.085079) 0.049112 / 0.043533 (0.005579) 0.301484 / 0.255139 (0.046345) 0.315306 / 0.283200 (0.032106) 0.102959 / 0.141683 (-0.038724) 1.420677 / 1.452155 (-0.031478) 1.549493 / 1.492716 (0.056777)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.284639 / 0.018006 (0.266633) 0.501226 / 0.000490 (0.500736) 0.004328 / 0.000200 (0.004128) 0.000091 / 0.000054 (0.000036)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.027034 / 0.037411 (-0.010377) 0.108066 / 0.014526 (0.093540) 0.122106 / 0.176557 (-0.054451) 0.162908 / 0.737135 (-0.574227) 0.127233 / 0.296338 (-0.169105)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.394023 / 0.215209 (0.178813) 3.932729 / 2.077655 (1.855075) 1.771195 / 1.504120 (0.267075) 1.582788 / 1.541195 (0.041594) 1.703219 / 1.468490 (0.234728) 0.702629 / 4.584777 (-3.882148) 3.780187 / 3.745712 (0.034475) 2.180433 / 5.269862 (-3.089428) 1.504806 / 4.565676 (-3.060871) 0.085289 / 0.424275 (-0.338986) 0.012580 / 0.007607 (0.004973) 0.515408 / 0.226044 (0.289363) 5.010613 / 2.268929 (2.741685) 2.256648 / 55.444624 (-53.187976) 1.914971 / 6.876477 (-4.961505) 2.038436 / 2.142072 (-0.103636) 0.846240 / 4.805227 (-3.958987) 0.164920 / 6.500664 (-6.335744) 0.063899 / 0.075469 (-0.011570)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.224160 / 1.841788 (-0.617627) 15.089995 / 8.074308 (7.015687) 14.777003 / 10.191392 (4.585611) 0.169873 / 0.680424 (-0.510551) 0.029233 / 0.534201 (-0.504968) 0.445424 / 0.579283 (-0.133859) 0.439194 / 0.434364 (0.004830) 0.536370 / 0.540337 (-0.003968) 0.636694 / 1.386936 (-0.750242)
PyArrow==latest
Show updated benchmarks!

Benchmark: benchmark_array_xd.json

metric read_batch_formatted_as_numpy after write_array2d read_batch_formatted_as_numpy after write_flattened_sequence read_batch_formatted_as_numpy after write_nested_sequence read_batch_unformated after write_array2d read_batch_unformated after write_flattened_sequence read_batch_unformated after write_nested_sequence read_col_formatted_as_numpy after write_array2d read_col_formatted_as_numpy after write_flattened_sequence read_col_formatted_as_numpy after write_nested_sequence read_col_unformated after write_array2d read_col_unformated after write_flattened_sequence read_col_unformated after write_nested_sequence read_formatted_as_numpy after write_array2d read_formatted_as_numpy after write_flattened_sequence read_formatted_as_numpy after write_nested_sequence read_unformated after write_array2d read_unformated after write_flattened_sequence read_unformated after write_nested_sequence write_array2d write_flattened_sequence write_nested_sequence
new / old (diff) 0.008230 / 0.011353 (-0.003122) 0.005499 / 0.011008 (-0.005509) 0.076108 / 0.038508 (0.037600) 0.037444 / 0.023109 (0.014335) 0.364420 / 0.275898 (0.088522) 0.412308 / 0.323480 (0.088828) 0.006704 / 0.007986 (-0.001282) 0.004359 / 0.004328 (0.000031) 0.075080 / 0.004250 (0.070830) 0.057698 / 0.037052 (0.020646) 0.366088 / 0.258489 (0.107599) 0.409583 / 0.293841 (0.115742) 0.037882 / 0.128546 (-0.090664) 0.012421 / 0.075646 (-0.063225) 0.087701 / 0.419271 (-0.331571) 0.050669 / 0.043533 (0.007136) 0.351139 / 0.255139 (0.096000) 0.384340 / 0.283200 (0.101140) 0.108097 / 0.141683 (-0.033586) 1.445010 / 1.452155 (-0.007145) 1.559570 / 1.492716 (0.066853)

Benchmark: benchmark_getitem_100B.json

metric get_batch_of_1024_random_rows get_batch_of_1024_rows get_first_row get_last_row
new / old (diff) 0.324114 / 0.018006 (0.306108) 0.549134 / 0.000490 (0.548644) 0.003544 / 0.000200 (0.003344) 0.000097 / 0.000054 (0.000042)

Benchmark: benchmark_indices_mapping.json

metric select shard shuffle sort train_test_split
new / old (diff) 0.030646 / 0.037411 (-0.006765) 0.108573 / 0.014526 (0.094047) 0.125291 / 0.176557 (-0.051266) 0.174798 / 0.737135 (-0.562338) 0.128000 / 0.296338 (-0.168338)

Benchmark: benchmark_iterating.json

metric read 5000 read 50000 read_batch 50000 10 read_batch 50000 100 read_batch 50000 1000 read_formatted numpy 5000 read_formatted pandas 5000 read_formatted tensorflow 5000 read_formatted torch 5000 read_formatted_batch numpy 5000 10 read_formatted_batch numpy 5000 1000 shuffled read 5000 shuffled read 50000 shuffled read_batch 50000 10 shuffled read_batch 50000 100 shuffled read_batch 50000 1000 shuffled read_formatted numpy 5000 shuffled read_formatted_batch numpy 5000 10 shuffled read_formatted_batch numpy 5000 1000
new / old (diff) 0.428881 / 0.215209 (0.213672) 4.282320 / 2.077655 (2.204665) 2.061462 / 1.504120 (0.557342) 1.858477 / 1.541195 (0.317283) 1.971646 / 1.468490 (0.503156) 0.723631 / 4.584777 (-3.861146) 3.822376 / 3.745712 (0.076664) 2.174427 / 5.269862 (-3.095434) 1.386066 / 4.565676 (-3.179611) 0.088391 / 0.424275 (-0.335884) 0.012948 / 0.007607 (0.005341) 0.524423 / 0.226044 (0.298378) 5.249389 / 2.268929 (2.980460) 2.528662 / 55.444624 (-52.915962) 2.245329 / 6.876477 (-4.631147) 2.402733 / 2.142072 (0.260660) 0.868864 / 4.805227 (-3.936364) 0.174066 / 6.500664 (-6.326598) 0.066165 / 0.075469 (-0.009304)

Benchmark: benchmark_map_filter.json

metric filter map fast-tokenizer batched map identity map identity batched map no-op batched map no-op batched numpy map no-op batched pandas map no-op batched pytorch map no-op batched tensorflow
new / old (diff) 1.296922 / 1.841788 (-0.544865) 15.814109 / 8.074308 (7.739801) 14.086059 / 10.191392 (3.894667) 0.190952 / 0.680424 (-0.489472) 0.017679 / 0.534201 (-0.516522) 0.428872 / 0.579283 (-0.150411) 0.435399 / 0.434364 (0.001035) 0.540856 / 0.540337 (0.000519) 0.648904 / 1.386936 (-0.738032)

AJDERS pushed a commit to AJDERS/datasets that referenced this pull request Feb 21, 2023
* speed up batched torch dataloader

* use latest torch

* style

* fix

* update torchaudio as well

* dont use latest torch in CI

* Update tests/test_arrow_dataset.py

Co-authored-by: Mario Šaško <mariosasko777@gmail.com>

---------

Co-authored-by: Mario Šaško <mariosasko777@gmail.com>
AJDERS added a commit to AJDERS/datasets that referenced this pull request Feb 21, 2023
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PyTorch BatchSampler still loads from Dataset one-by-one
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