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Sequencing software for embedding two-photon optogenetic stimulation in behavioural paradigms.

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TPBS

(Two-Photon Behaviour Sequencer)

Written by: Henry Dalgleish (@hwpdalgleish) in Michael Hausser's laboratory (UCL)

Sequencing software for embedding two-photon optogenetic stimulation in behavioural paradigms that can be imported and run by Lloyd Russell's PyBehaviour behavioural control software (https://github.com/llerussell/PyBehaviour).

User interface

Imgur

Requirements

  • ReadYAML - to read custom system parameters file.
  • MarkPointsXML - to generate Bruker specific 'MarkPoints' files.

As seen in

Dalgleish HWP*, Russell LE*, Packer AM*, Roth A, Gauld OM, Greenstreet F, Thompson EJ, Hausser M. How many neurons are sufficient for perception of cortical actiivty? eLife 2020;9:e5889.

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Sequencing software for embedding two-photon optogenetic stimulation in behavioural paradigms.

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