showsc

single cell web browser

usage:

make sure seurat rds in the work dir

cd data_process && docker build -t scweb . && docker run -it -v ${PWD}:/opt/soft scweb sh -c "/opt/conda/envs/sc_web/bin/Rscript seurat.R"

cd shiny_web && docker build -t shiny:build . && docker run --rm -p 3838:3838 -d -v {you apps dir}:/srv/shiny-server/ -v {log dir}:/var/log/shiny-server shiny:build