To run the model:
Compile the MOD files by running:
nrnivmodl in the terminal.
Run test_simulation.py to see behaviour of model STN cells and GPe cells.
STN cell as defined by: T. Otsuka, T. Abe, T. Tsukagawa, and W.-J. Song, “Conductance-Based Model of the Voltage-Dependent Generation of a Plateau Potential in Subthalamic Neurons,” J Neurophysiol, vol. 92, no. 1, pp. 255–264, Jul. 2004, doi: 10.1152/jn.00508.2003
GPe cell as defined by: A. Nambu and R. Llinas, “Electrophysiology of globus pallidus neurons in vitro,” J Neurophysiol, vol. 72, no. 3, pp. 1127–1139, Sep. 1994, doi: 10.1152/jn.1994.72.3.1127.
Run network.py to generate DBS signal, record STN LFP and plot Seaborn heatmaps/differential LFP recording. Run rasters.py to plot STN or GPe rasters.