Jennifer J. Stiens
Kinesin mutation database project
MSc in Bioinformatics, Birkbeck College, University of London
This is a thesis project for the MSc in Bioinformatics at Birkbeck College, University of London, supervised by Carolyn Moores and Maya Topf. It involves parsing COSMIC and TCGA databases for somatic mutations in cancer found in Kinesin-5 of genes, namely the human gene known as 'KIF11' or 'Eg5'. The relational database is a MySQL database and the other scripts are written in python. Statistical analysis is in R.
Code documentation and instructions on implementing and updating database are contained in 'user_instructions.pdf'