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CFDE Training Resources

This repository builds the public training materials for the CFDE: https://training.nih-cfde.org

The training website hosts tutorials and resources to learn how to perform bioinformatic analyses and access data. The GitHub repository contains CFDE internal resources, including the website style guide and website release protocol.

Check out our wiki pages for past workshop notes, mini tutorials on setup, and workshop attendee resources (i.e., for managing screen space).

Find answers to frequently asked questions on popular topics like AWS, Conda, Snakemake, RNA-Seq, etc. on our Discussion Board. If you don't find your particular question listed, we encourage you to post a new discussion and we will ensure to answer it promptly (you'll need a GitHub account to post).

We welcome suggestions for improvements as well as tutorial topics. Submit all training suggestions via CFDE HelpDesk: training@cfde.atlassian.net

Workshops

Check out our events calendar for upcoming workshops !

Past workshops:

June 30, 2021  •  Virtual Workshop

June 21 & 23, 2021  •  Virtual Workshop

June 16, 2021  •  Pop-up Workshop

June 9, 2021  •  Virtual Workshop

June 2, 2021  •  Virtual Workshop

CFDE Portal Demo
May 26, 2021  •  Pop-up Workshop

May 12 & 14, 2021  •  Virtual Workshop

April 28, 2021  •  Virtual Workshop

April 22, 2021  •  Virtual Workshop

April 21, 2021  •  Virtual Workshop

April 14, 2021  •  Pop-up Workshop

April 7, 2021  •  Virtual Workshop

March 18, 2021  •  Virtual Workshop

March 4, 2021  •  Virtual Workshop

Feb 25, 2021  •  Virtual Workshop

Jan 29, 2021  •  Virtual Workshop

Introduction to the Kids First Data Resource Portal
Dec 17, 2020  •  Virtual Workshop
Workshop Resources:  Setup  •  Explore  •  Queries

Contributing

Hello, if you'd like to contribute to the CFDE Training website, read on!

By contributing to this repository, you agree to release all your contributions under the same terms as the license itself: the Creative Commons Zero (aka Public Domain) license. If you are OK with this condition, then we welcome both you and your contribution!

If you have any questions about contributing, please open an issue or email the help desk (training@cfde.atlassian.net) and we will lend a hand at the earliest.