hpc_tools

Random collection of useful HPC scripts: job scripts for submission with slurm and torque, ...

Torque

qsub torque_job.sh
qsub -v myval=3 torque_job_val.sh

qstat
qstat -n
qstat -u userid

qdel jobid

Torque: array jobs

qsub -t 1980-2016 torque_array_job.sh

Slurm

sbatch slurm_job.sh
sbatch --export=myval='3' slurm_job_val.sh

squeue

scancel jobid

Slurm: array jobs

sbatch --array=1980-2016 slurm_array_job.sh