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logdelay

Code for Master Thesis in Mathematical Modelling jgil@2019-12-17

To enable the notebooks you need to activate the venv

Dataset

You need the file logdelay-original-dataset.tar.bz2 in logdelay/ From here, you need to uncompress it to create the data tree structure:

tar -jxf logdelay-original-dataset.tar.bz2

data
|-- external
|-- interim
|-- processed
`-- raw
    |-- ALMA
    `-- PARANAL

ENV Setup

If you haven't set your environment yet, go to logdelay and execute:

python -venv venv

in Mac, you need to instally pygraphviz and networkx

# option 1:
brew install graphviz
pip install pygraphviz
pip install networkx

# option 2, seems to not work anymore
pip install --install-option="--include-path=/usr/local/include/" --install-option="--library-path=/usr/local/lib/" pygraphviz

Then, go to logdelay/ and execute

source venv/bin/activate
pip install -r requirements.txt

Some common tricks:

# Freeze new dependencies
pip freeze > requirements.txt

Notebooks

Open Jupyter lab and browse into notebook folders:

jupyter lab

And browse into the notebooks.