-
Notifications
You must be signed in to change notification settings - Fork 9
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Excised from https://github.com/jpgill86/analysis/
- Loading branch information
Showing
26 changed files
with
3,295 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1 +1,48 @@ | ||
neurotic | ||
======== | ||
|
||
*Curate, visualize, and annotate your behavioral ephys data using Python* | ||
|
||
.. image:: https://img.shields.io/pypi/v/neurotic.svg | ||
:target: https://pypi.org/project/neurotic/ | ||
:alt: PyPI project | ||
|
||
.. image:: https://img.shields.io/badge/github-source_code-blue.svg | ||
:target: https://github.com/jpgill86/neurotic | ||
:alt: GitHub source code | ||
|
||
Installation | ||
------------ | ||
|
||
Because **neurotic** depends on some pre-release changes in a couple libraries, | ||
pip cannot automatically fetch all dependencies during normal setup. The file | ||
``requirements.txt`` is provided for installing the correct versions of | ||
dependencies. Both **neurotic** and its dependencies can be installed using | ||
these commands:: | ||
|
||
git clone https://github.com/jpgill86/neurotic | ||
cd neurotic | ||
pip install -r requirements.txt | ||
pip install . | ||
|
||
If you get an error while installing PyAV, try this:: | ||
|
||
conda install -c conda-forge av | ||
|
||
and then attempt to install the dependencies in ``requirements.txt`` again. | ||
|
||
Getting started | ||
--------------- | ||
|
||
Launch the standalone app from the command line:: | ||
|
||
neurotic | ||
|
||
A simple example is provided. Select the "example dataset", download the | ||
associated data, and then click launch. | ||
|
||
Questions and support | ||
--------------------- | ||
|
||
Please post any questions, problems, comments, or suggestions in the `GitHub | ||
issue tracker <https://github.com/jpgill86/neurotic/issues>`_. |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,12 @@ | ||
# -*- coding: utf-8 -*- | ||
""" | ||
Curate, visualize, and annotate your behavioral ephys data using Python | ||
""" | ||
|
||
from .version import version as __version__ | ||
from .version import git_revision as __git_revision__ | ||
|
||
from .datasets import * | ||
from .gui import * | ||
from .scripts import * | ||
from .utils import * |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,8 @@ | ||
# -*- coding: utf-8 -*- | ||
""" | ||
""" | ||
|
||
from .scripts import launch_standalone | ||
|
||
launch_standalone() |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,9 @@ | ||
# -*- coding: utf-8 -*- | ||
""" | ||
""" | ||
|
||
from ..datasets.ftpauth import * | ||
from ..datasets.download import * | ||
from ..datasets.metadata import * | ||
from ..datasets.data import * |
Oops, something went wrong.