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1. igvteam/igv igvteam/igv Public

   Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

   Java 647 386

2. igvteam/igv.js igvteam/igv.js Public

   Embeddable genomic visualization component based on the Integrative Genomics Viewer

   HTML 647 229

3. igvteam/igv-reports igvteam/igv-reports Public

   Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

   Python 352 53

4. igvteam/igv-notebook igvteam/igv-notebook Public

   Module for embedding igv.js in an IPython notebook

   JavaScript 66 13

5. igvteam/juicebox.js igvteam/juicebox.js Public

   HiC contact matrix visualization

   JavaScript 19 13

6. samtools/htsjdk samtools/htsjdk Public

   A Java API for high-throughput sequencing data (HTS) formats.

   Java 285 243