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Gene Expression Level Prediction System

! 開発中 !

Deep learningを用いた遺伝子発現量の予測システム(GELPS)

Activate Virtual Environment

before the work

  1. move to work space.
  2. (first time only)$ python3 -m venv [environment name]
  3. $ source [environment name]/bin/activate
  4. into the virtual env.

after the work is done

  1. $ deactivate
  2. leave the virtual env.

Directory Structure

dataloader.py

Required libraries

  • torch
  • torchvision
  • h5py ... e.t.c.

Installation by pip

$ pip install [library name]

Confirmation of libraries

$ pip list

About

the model which predict gene expression levels

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