Mongo7 upgrade #99
Workflow file for this run
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| name: KBase Handle Service 2 test | |
| on: | |
| pull_request: | |
| types: | |
| - opened | |
| - reopened | |
| - synchronize | |
| - ready_for_review | |
| push: | |
| # run workflow when merging to main or develop | |
| branches: | |
| - main | |
| - master | |
| - develop | |
| jobs: | |
| handle_service_tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - python: '3.9.19' | |
| mongo: 'mongodb-linux-x86_64-3.6.23' | |
| wired_tiger: 'false' | |
| - python: '3.9.19' | |
| mongo: 'mongodb-linux-x86_64-ubuntu2204-7.0.4' | |
| wired_tiger: 'true' | |
| steps: | |
| - name: Check out GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{matrix.python}} | |
| - name: Install dependencies and set up test config | |
| shell: bash | |
| env: | |
| AUTH_SERVICE_URL: https://ci.kbase.us/services/auth/api/legacy/KBase/Sessions/Login | |
| AUTH_URL: https://ci.kbase.us/services/auth | |
| BLOBSTORE_URL: https://ci.kbase.us/services/shock-api | |
| TEST_TOKEN: ${{secrets.KBASE_CI_TOKEN}} | |
| ADMIN_TOKEN: ${{secrets.KBASE_CI_TOKEN}} | |
| run: | | |
| # install python libraries | |
| python -m pip install --upgrade pip | |
| pip install pipenv | |
| pipenv sync --system --dev | |
| # set up mongo | |
| cd .. | |
| wget -q http://fastdl.mongodb.org/linux/${{matrix.mongo}}.tgz | |
| tar xfz ${{matrix.mongo}}.tgz | |
| export MONGOD=`pwd`/${{matrix.mongo}}/bin/mongod | |
| cd - | |
| # set up test config | |
| cp -n test.cfg.example test.cfg | |
| sed -i "s#^test.temp.dir =.*#test.temp.dir=temp_test_dir#" test.cfg | |
| sed -i "s#^test.mongo.exe.*#test.mongo.exe=$MONGOD#" test.cfg | |
| sed -i "s#^test.mongo.wired_tiger.*#test.mongo.wired_tiger=${{matrix.wired_tiger}}#" test.cfg | |
| sed -i "s#^auth-service-url.*#auth-service-url=$AUTH_SERVICE_URL#" test.cfg | |
| sed -i "s#^auth-url.*#auth-url=$AUTH_URL#" test.cfg | |
| sed -i "s#^shock-url.*#shock-url=$BLOBSTORE_URL#" test.cfg | |
| sed -i "s#^test-token.*#test-token=$TEST_TOKEN#" test.cfg | |
| sed -i "s#^admin-token.*#admin-token=$ADMIN_TOKEN#" test.cfg | |
| - name: Run tests | |
| shell: bash | |
| run: | | |
| export HOMEDIR=`pwd` | |
| export PYTHONPATH=$HOMEDIR/test:$HOMEDIR/lib:$PYTHONPATH | |
| echo $PYTHONPATH | |
| export HANDLE_SERVICE_TEST_CFG=$HOMEDIR/test.cfg | |
| pytest --cov=lib/AbstractHandle --cov-report=xml test | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| fail_ci_if_error: true |