This repository contains the code (not data) for the following paper:
- Kerkelä L, Seunarine K, Szczepankiewicz F and Clark CA (2024) Spherical convolutional neural networks can improve brain microstructure estimation from diffusion MRI data. Front. Neuroimaging 3:1349415. doi: 10.3389/fnimg.2024.1349415
The sCNN implementation can be found in the scnn package. I used the Conda environment environment/scnn.yml to run the code except that environment/dmipy.yml was used for conventional fitting.