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🐛 fix refname call
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dmiller15 committed Feb 29, 2024
1 parent c22c019 commit 5fe6984
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions .github/workflows/release_submodule_updater.yml
Original file line number Diff line number Diff line change
Expand Up @@ -61,22 +61,22 @@ jobs:
cd germline
git submodule update --remote --recursive kf-annotation-tools
cd kf-annotation-tools
git checkout github.ref_name
git checkout $GITHUB_REF_NAME
cd ../../joint-genotyping
git submodule update --remote --recursive kf-annotation-tools
cd kf-annotation-tools
git checkout github.ref_name
git checkout $GITHUB_REF_NAME
- id: update-somatic-submodules
if: ${{ env.SOMATIC_VERSION == github.ref_name }}
run: |
cd somatic
git submodule update --remote --recursive kf-annotation-tools
cd kf-annotation-tools
git checkout github.ref_name
git checkout $GITHUB_REF_NAME
cd ../../tumor-only
git submodule update --remote --recursive kf-annotation-tools
cd kf-annotation-tools
git checkout github.ref_name
git checkout $GITHUB_REF_NAME
- id: cpr-germline
if: ${{ env.GERMLINE_VERSION == github.ref_name }}
name: Create Pull Request
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