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Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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  1. ulelab/peka ulelab/peka Public

    Find motifs enriched around prominent crosslinks

    Python 5 2

  2. ulelab/cluster_kmers ulelab/cluster_kmers Public

    Get clusters of k-mers based solely on their sequence or in combination with enrichment in PEKA.

    Python

  3. ulelab/gtf-ops ulelab/gtf-ops Public

    Filtering GENCODE or ENSEMBLE annotation in GTF format. Annotating missing regions in iCount genomic segmentation.

    Python

  4. ulelab/LIN28A_RNPreassembly_bioinformatics ulelab/LIN28A_RNPreassembly_bioinformatics Public

    This repository contains the source code used for bioinformatic analyses presented in the paper by Modic et al., 2024 "Poised PABP-RNA hubs implement signal-dependent mRNA decay in development".

    Jupyter Notebook