MEDical Image Processing Tools

Medical image processing tools built on numpy, scipy, and SimpleITK.

Install instructions

With Conda

If SimpleITK is installed:

• conda install -c medipt medipt

If SimpleITK is not installed:

• conda install -c medipt -c conda-forge -c simpleitk medipt

With pip

• pip install -i https://pypi.anaconda.org/medipt/simple medipt

Requirements

• Python >= 3.7
• SimpleITK >= 2.2
• numpy >= 1.20
• scipy >= 1.6

Usage

Example can be found in here for how to augment and resample a 3D image.