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test country mugration
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@ktmeaton
ktmeaton committed Dec 12, 2020
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20 changes: 10 additions & 10 deletions docs/results/2020-12-08/metadata/metadata.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -175,12 +175,12 @@ GCA_001294835.1_ASM129483v1_genomic I-3189 1986 -34 Mongolia Omnogovi 46.8250388
GCA_000950935.1_ASM95093v1_genomic I-2422 1974 -46 Mongolia Bayan-Olgii 46.8250388 103.8499736 48.5470083 89.8549358 Ulegeica
GCA_000950945.1_ASM95094v1_genomic I-3189 1986 -34 Mongolia Omnogovi 46.8250388 103.8499736 49.10457325 91.56421013087612 Ulegeica
GCA_003122795.1_Y.pestis_I-2422_genomic I-2422 1974 -46 Mongolia Bayan-Olgii 46.8250388 103.8499736 48.5470083 89.8549358 Ulegeica
GCA_002981995.1_ASM298199v1_genomic I-2457 1973 -47 M13 NA 34.7328615 135.498533 NA NA NA
GCA_002981975.1_ASM298197v1_genomic I-2422 1974 -46 M02 NA 35.6993987 139.6357088 NA NA NA
GCA_002981925.1_ASM298192v1_genomic I-2236 1972 -48 M01 NA 35.1437974 136.9019553 NA NA NA
GCA_002981915.1_ASM298191v1_genomic I-3190 1986 -34 M13 NA 34.7328615 135.498533 NA NA NA
GCA_002981955.1_ASM298195v1_genomic I-2238 1972 -48 M01 NA 35.1437974 136.9019553 NA NA NA
GCA_002981895.1_ASM298189v1_genomic I-2231 1972 -48 M01 NA 35.1437974 136.9019553 NA NA NA
GCA_002981995.1_ASM298199v1_genomic I-2457 1973 -47 Mongolia Ömnögovi 46.8250388 103.8499736 43.282363 104.1133864 NA
GCA_002981975.1_ASM298197v1_genomic I-2422 1974 -46 Mongolia Bayan-Ölgii 46.8250388 103.8499736 48.5470083 89.8549358 NA
GCA_002981925.1_ASM298192v1_genomic I-2236 1972 -48 Mongolia Bayan-Ölgii 46.8250388 103.8499736 48.5470083 89.8549358 NA
GCA_002981915.1_ASM298191v1_genomic I-3190 1986 -34 Mongolia Ömnögovi 46.8250388 103.8499736 43.282363 104.1133864 NA
GCA_002981955.1_ASM298195v1_genomic I-2238 1972 -48 Mongolia Bayan-Ölgii 46.8250388 103.8499736 48.5470083 89.8549358 NA
GCA_002981895.1_ASM298189v1_genomic I-2231 1972 -48 Mongolia Bayan-Ölgii 46.8250388 103.8499736 48.5470083 89.8549358 NA
GCA_001295105.1_ASM129510v1_genomic С-235 1968 -52 Azerbaijan Goranboy District 40.3936294 47.7872508 40.606553399999996 46.705009816557116 Caucasica
GCA_003074535.1_ASM307453v1_genomic 5M 1952 -68 Kyrgyzstan Issyk-Kul Region 41.5089324 74.724091 42.06103415 78.1707323234642 Antiqua
GCA_003074595.1_ASM307459v1_genomic 262 1967 -53 Kyrgyzstan Issyk-Kul Region 41.5089324 74.724091 42.06103415 78.1707323234642 Antiqua
Expand Down Expand Up @@ -222,7 +222,7 @@ GCA_003086075.1_ASM308607v1_genomic A-1825 1983 -37 Uzbekistan Navoiy Region 41.
GCA_003086035.1_ASM308603v1_genomic 2751-55 2012 -8 Russia Altai Republic 64.6863136 97.7453061 50.7114101 86.8572186 Altaica
GCA_001693595.1_ASM169359v1_genomic Cadman 2016 -4 United States of America New Mexico 39.7837304 -100.4458825 34.5708167 -105.993007 NA
GCA_003085855.1_ASM308585v1_genomic M-1773 2002 -18 Russia Astrakhan Oblast 64.6863136 97.7453061 47.1878186 47.608851 Medievalis
GCA_000835005.1_ASM83500v1_genomic Nairobi 1985 -35 Kenya Nairobi 1.4419683 38.4313975 -1.2832533 36.8172449 Antiqua
GCA_000835005.1_ASM83500v1_genomic Nairobi 1985 -35 Kenya Nairobi 1.4419683 38.4313975 -1.3031689499999999 36.826061224105075 Antiqua
GCA_000834985.1_ASM83498v1_genomic Pestoides G [1950:1984] [-70:-36] NA NA NA NA NA NA NA
GCA_001559935.1_ASM155993v1_genomic KM918 1989 -31 Russia Kabardino-Balkaria 64.6863136 97.7453061 43.4428286 43.4204809 Medievalis
GCA_001509855.1_ASM150985v1_genomic Yp2126 2011 -9 United States of America Arizona 39.7837304 -100.4458825 34.395342 -111.7632755 NA
Expand Down Expand Up @@ -530,9 +530,9 @@ SAMN00715800 8291 [1348:1350] [-672:-670] England Greater London 52.5310214 -1.2
SAMEA3541827 RISE509 [-2876:-2677] [-4896:-4697] Russia Krasnoyarsk Krai 64.6863136 97.7453061 63.3233807 97.0979974 Bronze Age Plague
SAMEA3541826 RISE505 [-1746:-1626] [-3766:-3646] Russia Altai Krai 64.6863136 97.7453061 52.6932243 82.6931424 Bronze Age Plague
SAMEA1061800 DA101 [214:261] [-1806:-1759] Kyrgyzstan Issyk-Kul Region 41.5089324 74.724091 42.06103415 78.1707323234642 Pre-First Pandemic
IP283 IP283 1994 -26 India Gujarat 22.3511148 78.6677428 22.3850008 71.7452633 Orientalis
IP562 IP562 1947 -73 Iran Kurdistan 32.6475314 54.5643516 35.672803 47.0124376 Medievalis
IP557 IP557 1963 -57 Iran Kurdistan 32.6475314 54.5643516 35.672803 47.0124376 Medievalis
IP579 IP579 1908 -112 India NA 22.3511148 78.6677428 NA NA Orientalis
IP542 IP542 1952 -68 Kenya NA 1.4419683 38.4313975 NA NA Antiqua
IP562 IP562 1947 -73 Iran Kurdistan 32.6475314 54.5643516 35.672803 47.0124376 Medievalis
IP543 IP543 1953 -67 Democratic Republic of the Congo NA -2.9814344 23.8222636 NA NA Antiqua
IP282 NA NA NA NA NA NA NA NA NA NA
IP542 IP542 1952 -68 Kenya NA 1.4419683 38.4313975 NA NA Antiqua
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499 changes: 499 additions & 0 deletions docs/results/2020-12-08/treetime/treetime_biovar_mug.log
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