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v0.2.6 #6

Merged
merged 188 commits into from
Apr 27, 2021
Merged

v0.2.6 #6

merged 188 commits into from
Apr 27, 2021

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ktmeaton
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plague-phylogeography Pull Request

Thank you for contributing to plague-phylogeography! Please complete the following steps:

1. Description

This PR introduces LSD2 and BEAST to the workflow.

2. Submission Type

  • Bug fix
  • New feature
  • Other

3. Continuous Integration

After submitting, Continuous integration (CI) will run via Github Actions. This includes:

  • Install (conda and docker )
  • Linting (lints markdown, yaml, and python...)
  • Pipeline Local (phylogenetic analysis of local reads and assemblies)
  • Pipeline SRA (phylogenetic analysis of remote sra data)
  • Pipeline Assembly (phylogenetic analysis of remote assembly data)

@ktmeaton ktmeaton merged commit 47d7fef into master Apr 27, 2021
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