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Update releaser.yml
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thetechnocrat-dev authored Oct 17, 2023
1 parent 6d4a817 commit 78d9acb
Showing 1 changed file with 0 additions and 14 deletions.
14 changes: 0 additions & 14 deletions .github/workflows/releaser.yml
Original file line number Diff line number Diff line change
Expand Up @@ -56,17 +56,3 @@ jobs:

- name: Extract release file
run: tar -xvzf plex_${{ steps.tag_name.outputs.release }}_linux_amd64.tar.gz

- name: Run Equibind
run: |
result_dir=$(./plex init -t tools/equibind.json -i '{"protein": ["testdata/binding/abl/7n9g.pdb"], "small_molecule": ["testdata/binding/abl/ZINC000003986735.sdf"]}' --scatteringMethod=dotProduct --autoRun=true -a test -a ci | grep 'Finished processing, results written to' | sed -n 's/^.*Finished processing, results written to //p' | sed 's/\/io.json//')
cd "$result_dir/entry-0/outputs"
if [ "$(find . -name '*docked.sdf' | grep 'docked.sdf')" == "" ]; then
echo "No docked files found"
exit 1
else
echo "Docked files found:"
find . -name '*docked.sdf' | grep 'docked.sdf'
fi
env:
PLEX_ACCESS_TOKEN: ${{ secrets.PLEX_ACCESS_TOKEN }}

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