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LatchBio

infrastructure for bioinformatics

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The LatchBio SDK

Why the LatchBio SDK

The previous generation of bioinformatics frameworks, eg. nextflow, Snakemake, WDL, etc., are difficult to develop with, use outdated languages, and lack features needed in a modern software framework.

The LatchBio SDK is a workflow description language built with an emphasis on developer ergonomics and the following mission-critical features:

Latch Verified

Latch Verified is a set of curated bioinformatics workflows built using the SDK. Check out source code and documentation at the linked repository.

Further Reading

Slack

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  1. latch latch Public

    a python bioinformatics framework

    Python 159 17

  2. lgenome lgenome Public

    Manage curated genomic resources for bioinformatics workflows.

    Python 2

Repositories

Showing 10 of 69 repositories
  • latchbio/nextflow’s past year of commit activity
    Groovy 0 Apache-2.0 624 0 2 Updated Sep 6, 2024
  • latch Public

    a python bioinformatics framework

    latchbio/latch’s past year of commit activity
    Python 159 MIT 17 24 9 Updated Sep 4, 2024
  • igv.js Public Forked from igvteam/igv.js

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    latchbio/igv.js’s past year of commit activity
    JavaScript 0 MIT 225 0 0 Updated Sep 4, 2024
  • rstudio Public Forked from rstudio/rstudio

    RStudio is an integrated development environment (IDE) for R

    latchbio/rstudio’s past year of commit activity
    Java 0 1,102 0 1 Updated Sep 3, 2024
  • sysbox-eks-ami Public

    Sysbox on Ubuntu AWS EC2 AMI for EKS nodes

    latchbio/sysbox-eks-ami’s past year of commit activity
    HCL 3 CC0-1.0 2 1 5 Updated Aug 30, 2024
  • sysbox Public Forked from nestybox/sysbox

    An open-source, next-generation "runc" that empowers rootless containers to run workloads such as Systemd, Docker, Kubernetes, just like VMs.

    latchbio/sysbox’s past year of commit activity
    Shell 0 Apache-2.0 151 0 0 Updated Aug 28, 2024
  • latchbio/latch-plots-faas’s past year of commit activity
    Python 0 CC0-1.0 0 0 0 Updated Aug 26, 2024
  • dockerfiles Public Forked from nestybox/dockerfiles

    Dockerfiles repository

    latchbio/dockerfiles’s past year of commit activity
    Dockerfile 0 MIT 26 0 0 Updated Aug 19, 2024
  • sysbox-pkgr Public Forked from nestybox/sysbox-pkgr

    Sysbox-pkgr repository

    latchbio/sysbox-pkgr’s past year of commit activity
    Shell 0 13 0 0 Updated Aug 19, 2024
  • loro Public Forked from loro-dev/loro

    Reimagine state management with CRDTs. Make your app collaborative effortlessly.

    latchbio/loro’s past year of commit activity
    Rust 0 MIT 70 0 0 Updated Jul 19, 2024

Sponsoring

  • @vitejs
  • @pdm-project
  • @Dreamsorcerer
  • @webknjaz
  • @gnachman
  • @asvetlov
  • @dvarrazzo
  • @benjie

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