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Gc time #311

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Jan 8, 2018
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6 changes: 6 additions & 0 deletions app-conf/HeuristicConf.xml
Original file line number Diff line number Diff line change
Expand Up @@ -193,5 +193,11 @@
<classname>com.linkedin.drelephant.spark.heuristics.StagesHeuristic</classname>
<viewname>views.html.help.spark.helpStagesHeuristic</viewname>
</heuristic>
<heuristic>
<applicationtype>spark</applicationtype>
<heuristicname>Spark GC Time to CPU Time</heuristicname>
<classname>com.linkedin.drelephant.spark.heuristics.GcCpuTimeHeuristic</classname>

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Please change the references to CPUTime to runtime, since we are using executor run/duration time now.

<viewname>views.html.help.spark.helpGcCpuTimeHeuristic</viewname>
</heuristic>

</heuristics>
Original file line number Diff line number Diff line change
Expand Up @@ -87,6 +87,7 @@ trait ExecutorSummary{
def totalShuffleRead: Long
def totalShuffleWrite: Long
def maxMemory: Long
def totalGCTime: Long
def executorLogs: Map[String, String]}

trait JobData{
Expand Down Expand Up @@ -292,6 +293,7 @@ class ExecutorSummaryImpl(
var totalShuffleRead: Long,
var totalShuffleWrite: Long,
var maxMemory: Long,
var totalGCTime: Long,
var executorLogs: Map[String, String]) extends ExecutorSummary

class JobDataImpl(
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Original file line number Diff line number Diff line change
@@ -0,0 +1,108 @@
/*
* Copyright 2016 LinkedIn Corp.
*
* Licensed under the Apache License, Version 2.0 (the "License"); you may not
* use this file except in compliance with the License. You may obtain a copy of
* the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
* WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
* License for the specific language governing permissions and limitations under
* the License.
*/

package com.linkedin.drelephant.spark.heuristics

import com.linkedin.drelephant.analysis.Severity
import com.linkedin.drelephant.spark.fetchers.statusapiv1._
import com.linkedin.drelephant.analysis._
import com.linkedin.drelephant.configurations.heuristic.HeuristicConfigurationData
import com.linkedin.drelephant.spark.data.SparkApplicationData
import scala.collection.JavaConverters

/**
* A heuristic based on GC time and CPU run time
*

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Extra line.

*/
class GcCpuTimeHeuristic(private val heuristicConfigurationData: HeuristicConfigurationData)
extends Heuristic[SparkApplicationData] {

import GcCpuTimeHeuristic._
import JavaConverters._

override def getHeuristicConfData(): HeuristicConfigurationData = heuristicConfigurationData

override def apply(data: SparkApplicationData): HeuristicResult = {
val evaluator = new Evaluator(this, data)
var resultDetails = Seq(
new HeuristicResultDetails("GC time to Executor Run time ratio", evaluator.ratio.toString),
new HeuristicResultDetails("GC total time", evaluator.jvmTime.toString),
new HeuristicResultDetails("Executor Run time", evaluator.executorRunTimeTotal.toString)
)

//adding recommendations to the result, severityTimeA corresponds to the ascending severity calculation
if (evaluator.severityTimeA.getValue > Severity.LOW.getValue) {
resultDetails = resultDetails :+ new HeuristicResultDetails("Note", "The ratio of JVM GC Time and executor Time is above normal, we recommend to increase the executor memory")
}
//severityTimeD corresponds to the descending severity calculation
if (evaluator.severityTimeD.getValue > Severity.LOW.getValue) {
resultDetails = resultDetails :+ new HeuristicResultDetails("Note", "The ratio of JVM GC Time and executor Time is below normal, we recommend to decrease the executor memory")
}

val result = new HeuristicResult(
heuristicConfigurationData.getClassName,
heuristicConfigurationData.getHeuristicName,
evaluator.severity,
0,
resultDetails.asJava
)
result
}
}

object GcCpuTimeHeuristic {
val SPARK_EXECUTOR_MEMORY = "spark.executor.memory"
val SPARK_EXECUTOR_CORES = "spark.executor.cores"

/** The ascending severity thresholds for the ratio of JVM GC Time and executor Run Time (checking whether ratio is above normal)
* These thresholds are experimental and are likely to change */
val DEFAULT_GC_SEVERITY_A_THRESHOLDS =
SeverityThresholds(low = 0.08D, moderate = 0.1D, severe = 0.15D, critical = 0.2D, ascending = true)
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/** The descending severity thresholds for the ratio of JVM GC Time and executor Run Time (checking whether ratio is below normal)
* These thresholds are experimental and are likely to change */
val DEFAULT_GC_SEVERITY_D_THRESHOLDS =
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Same as above.

SeverityThresholds(low = 0.05D, moderate = 0.04D, severe = 0.03D, critical = 0.01D, ascending = false)

class Evaluator(memoryFractionHeuristic: GcCpuTimeHeuristic, data: SparkApplicationData) {
lazy val executorSummaries: Seq[ExecutorSummary] = data.executorSummaries
lazy val appConfigurationProperties: Map[String, String] =
data.appConfigurationProperties
var (jvmTime, executorRunTimeTotal) = getTimeValues(executorSummaries)

var ratio: Double = jvmTime.toDouble / executorRunTimeTotal.toDouble

lazy val severityTimeA: Severity = DEFAULT_GC_SEVERITY_A_THRESHOLDS.severityOf(ratio)
lazy val severityTimeD: Severity = DEFAULT_GC_SEVERITY_D_THRESHOLDS.severityOf(ratio)
lazy val severity : Severity = Severity.max(severityTimeA, severityTimeD)

/**
* returns the total JVM GC Time and total executor Run Time across all stages
* @param executorSummaries
* @return
*/
private def getTimeValues(executorSummaries: Seq[ExecutorSummary]): (Long, Long) = {
var jvmGcTimeTotal: Long = 0
var executorRunTimeTotal: Long = 0
executorSummaries.foreach(executorSummary => {
jvmGcTimeTotal+=executorSummary.totalGCTime
executorRunTimeTotal+=executorSummary.totalDuration
})
(jvmGcTimeTotal, executorRunTimeTotal)
}
}
}

Original file line number Diff line number Diff line change
Expand Up @@ -173,6 +173,7 @@ object LegacyDataConverters {
executorInfo.shuffleRead,
executorInfo.shuffleWrite,
executorInfo.maxMem,
executorInfo.totalGCTime,
executorLogs = Map.empty
)
}
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -43,14 +43,15 @@ public static class ExecutorInfo {
public long inputBytes = 0L;
public long outputBytes = 0L;
public long shuffleRead = 0L;
public long totalGCTime = 0L;
public long shuffleWrite = 0L;

public String toString() {
return "{execId: " + execId + ", hostPort:" + hostPort + " , rddBlocks: " + rddBlocks + ", memUsed: " + memUsed
+ ", maxMem: " + maxMem + ", diskUsed: " + diskUsed + ", totalTasks" + totalTasks + ", tasksActive: "
+ activeTasks + ", tasksComplete: " + completedTasks + ", tasksFailed: " + failedTasks + ", duration: "
+ duration + ", inputBytes: " + inputBytes + ", outputBytes:" + outputBytes + ", shuffleRead: " + shuffleRead
+ ", shuffleWrite: " + shuffleWrite + "}";
+ ", shuffleWrite: " + shuffleWrite + ", totalGCTime: " + totalGCTime + "}";
}
}

Expand Down
6 changes: 6 additions & 0 deletions app/views/help/spark/helpGcCpuTimeHeuristic.scala.html
Original file line number Diff line number Diff line change
@@ -0,0 +1,6 @@
<p>The ratio of jvmGcTime to executorCpuTime is checked, to see if GC is taking too much time (providing more memory could help) or too little time (memory may be over provisioned, and can be reduced).</p>

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Should this mention the descending thresholds as well?

<p>The severity thresholds are as follows : </p>
<p>Low: avg (jvmGcTime / executorCpuTime) >= .08</p>
<p>Moderate: avg (jvmGcTime / executorCpuTime) >= .1</p>
<p>Critical: avg (jvmGcTime / executorCpuTime) >= .15</p>
<p>Severe:avg (jvmGcTime / executorCpuTime) >= .2</p>
Original file line number Diff line number Diff line change
Expand Up @@ -194,6 +194,7 @@ object SparkMetricsAggregatorTest {
totalShuffleRead = 0,
totalShuffleWrite = 0,
maxMemory = 0,
totalGCTime = 0,
executorLogs = Map.empty
)
}
Original file line number Diff line number Diff line change
@@ -0,0 +1,138 @@
/*

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The file name seems to be ExecutorStorageSpillHeuristicTest.scala -- should this be renamed to ExecutorGcRuntimeHeuristicTest.scala?

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Done

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Can you push the changes you have made? The PR doesn't reflect this change.

* Copyright 2016 LinkedIn Corp.
*
* Licensed under the Apache License, Version 2.0 (the "License"); you may not
* use this file except in compliance with the License. You may obtain a copy of
* the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
* WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
* License for the specific language governing permissions and limitations under
* the License.
*/

package com.linkedin.drelephant.spark.heuristics

import scala.collection.JavaConverters
import com.linkedin.drelephant.analysis.{ApplicationType, Severity, SeverityThresholds}
import com.linkedin.drelephant.configurations.heuristic.HeuristicConfigurationData
import com.linkedin.drelephant.spark.data.{SparkApplicationData, SparkLogDerivedData, SparkRestDerivedData}
import com.linkedin.drelephant.spark.fetchers.statusapiv1.{ApplicationInfoImpl, ExecutorSummaryImpl, StageDataImpl}
import org.apache.spark.scheduler.SparkListenerEnvironmentUpdate
import org.scalatest.{FunSpec, Matchers}

import scala.concurrent.duration.Duration


class GcCpuTimeHeuristicTest extends FunSpec with Matchers {
import GcCpuTimeHeuristicTest._

describe("GcCpuTimeHeuristic") {
val heuristicConfigurationData = newFakeHeuristicConfigurationData(
Map(
"max_to_median_ratio_severity_thresholds" -> "1.414,2,4,16",
"ignore_max_bytes_less_than_threshold" -> "4000000",
"ignore_max_millis_less_than_threshold" -> "4000001"
)
)
val gcCpuTimeHeuristic = new GcCpuTimeHeuristic(heuristicConfigurationData)

val executorSummaries = Seq(
newFakeExecutorSummary(
id = "1",
totalGCTime = Duration("2min").toMillis,
totalDuration = Duration("15min").toMillis
),
newFakeExecutorSummary(
id = "2",
totalGCTime = Duration("6min").toMillis,
totalDuration = Duration("14min").toMillis
),
newFakeExecutorSummary(
id = "3",
totalGCTime = Duration("4min").toMillis,
totalDuration = Duration("20min").toMillis
),
newFakeExecutorSummary(
id = "4",
totalGCTime = Duration("8min").toMillis,
totalDuration = Duration("30min").toMillis
)
)

describe(".apply") {
val data1 = newFakeSparkApplicationData(executorSummaries)
val heuristicResult = gcCpuTimeHeuristic.apply(data1)
val heuristicResultDetails = heuristicResult.getHeuristicResultDetails

it("returns the severity") {
heuristicResult.getSeverity should be(Severity.CRITICAL)
}

it("returns the JVM GC time to Executor Run time duration") {
val details = heuristicResultDetails.get(0)
details.getName should include("GC time to Executor Run time ratio")
details.getValue should include("0.2531")
}

it("returns the total GC time") {
val details = heuristicResultDetails.get(1)
details.getName should include("GC total time")
details.getValue should be("1200000")
}

it("returns the executor's run time") {
val details = heuristicResultDetails.get(2)
details.getName should include("Executor Run time")
details.getValue should be("4740000")
}
}
}
}

object GcCpuTimeHeuristicTest {
import JavaConverters._

def newFakeHeuristicConfigurationData(params: Map[String, String] = Map.empty): HeuristicConfigurationData =
new HeuristicConfigurationData("heuristic", "class", "view", new ApplicationType("type"), params.asJava)

def newFakeExecutorSummary(
id: String,
totalGCTime: Long,
totalDuration: Long
): ExecutorSummaryImpl = new ExecutorSummaryImpl(
id,
hostPort = "",
rddBlocks = 0,
memoryUsed=0,
diskUsed = 0,
activeTasks = 0,
failedTasks = 0,
completedTasks = 0,
totalTasks = 0,
totalDuration,
totalInputBytes=0,
totalShuffleRead=0,
totalShuffleWrite= 0,
maxMemory= 0,
totalGCTime,
executorLogs = Map.empty
)

def newFakeSparkApplicationData(
executorSummaries: Seq[ExecutorSummaryImpl]
): SparkApplicationData = {
val appId = "application_1"

val restDerivedData = SparkRestDerivedData(
new ApplicationInfoImpl(appId, name = "app", Seq.empty),
jobDatas = Seq.empty,
stageDatas = Seq.empty,
executorSummaries = executorSummaries
)
SparkApplicationData(appId, restDerivedData, None)
}
}
Original file line number Diff line number Diff line change
Expand Up @@ -249,6 +249,7 @@ object ExecutorsHeuristicTest {
totalShuffleRead,
totalShuffleWrite,
maxMemory,
totalGCTime = 0,
executorLogs = Map.empty
)

Expand Down