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scidoc fix for PR626 #3

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Apr 16, 2021
Merged

scidoc fix for PR626 #3

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24ce7d6
scidoc fix
mzhangw Apr 15, 2021
8a27681
change version # from 5 to 1 per agreement with NCAR colleagues
mzhangw Apr 15, 2021
046f585
use new syntax in SDF files
mzhangw Apr 16, 2021
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5 changes: 3 additions & 2 deletions physics/docs/pdftxt/CPT_adv_suite.txt
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Expand Up @@ -23,7 +23,7 @@ The csawmg physics suite uses the parameterizations in the following order:
\code
<?xml version="1.0" encoding="UTF-8"?>

<suite name="SCM_csawmg" lib="ccppphys" ver="5">
<suite name="SCM_csawmg" version="1">
<!-- <init></init> -->
<group name="time_vary">
<subcycle loop="1">
Expand Down Expand Up @@ -86,9 +86,9 @@ The csawmg physics suite uses the parameterizations in the following order:
<scheme>GFS_suite_stateout_update</scheme>
<scheme>ozphys_2015</scheme>
<scheme>h2ophys</scheme>
<scheme>GFS_DCNV_generic_pre</scheme>
<scheme>get_phi_fv3</scheme>
<scheme>GFS_suite_interstitial_3</scheme>
<scheme>GFS_DCNV_generic_pre</scheme>
<scheme>cs_conv_pre</scheme>
<scheme>cs_conv</scheme>
<scheme>cs_conv_post</scheme>
Expand All @@ -105,6 +105,7 @@ The csawmg physics suite uses the parameterizations in the following order:
<scheme>cs_conv_aw_adj</scheme>
<scheme>GFS_MP_generic_post</scheme>
<scheme>maximum_hourly_diagnostics</scheme>
<scheme>phys_tend</scheme>
</subcycle>
</group>
<!-- <finalize></finalize> -->
Expand Down
2 changes: 1 addition & 1 deletion physics/docs/pdftxt/GFSv15p2_suite.txt
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Expand Up @@ -26,7 +26,7 @@ The GFS_v15p2 physics suite uses the parameterizations in the following order:
\code
<?xml version="1.0" encoding="UTF-8"?>

<suite name="FV3_GFS_v15p2" lib="ccppphys" ver="5">
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<suite name="FV3_GFS_v15p2" version="1">
<!-- <init></init> -->
<group name="fast_physics">
<subcycle loop="1">
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2 changes: 1 addition & 1 deletion physics/docs/pdftxt/GFSv16beta_suite.txt
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Expand Up @@ -29,7 +29,7 @@ The GFS_v16beta physics suite uses the parameterizations in the following order:
\code
<?xml version="1.0" encoding="UTF-8"?>

<suite name="FV3_GFS_v16beta" lib="ccppphys" ver="5">
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<suite name="FV3_GFS_v16beta" version="1">
<!-- <init></init> -->
<group name="fast_physics">
<subcycle loop="1">
Expand Down
12 changes: 8 additions & 4 deletions physics/docs/pdftxt/GSD_adv_suite.txt
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Expand Up @@ -31,7 +31,7 @@ The GSD_v1 physics suite uses the parameterizations in the following order:
\code
<?xml version="1.0" encoding="UTF-8"?>

<suite name="SCM_GSD_v1" lib="ccppphys" ver="5">
<suite name="SCM_GSD_v1" version="1">
<!-- <init></init> -->
<group name="time_vary">
<subcycle loop="1">
Expand All @@ -44,14 +44,14 @@ The GSD_v1 physics suite uses the parameterizations in the following order:
<group name="radiation">
<subcycle loop="1">
<scheme>GFS_suite_interstitial_rad_reset</scheme>
<scheme>sgscloud_radpre</scheme>
<scheme>GFS_rrtmg_pre</scheme>
<scheme>rrtmg_sw_pre</scheme>
<scheme>mynnrad_pre</scheme>
<scheme>rrtmg_sw</scheme>
<scheme>rrtmg_sw_post</scheme>
<scheme>rrtmg_lw_pre</scheme>
<scheme>rrtmg_lw</scheme>
<scheme>mynnrad_post</scheme>
<scheme>sgscloud_radpost</scheme>
<scheme>rrtmg_lw_post</scheme>
<scheme>GFS_rrtmg_post</scheme>
</subcycle>
Expand All @@ -76,6 +76,9 @@ The GSD_v1 physics suite uses the parameterizations in the following order:
<scheme>sfc_nst</scheme>
<scheme>sfc_nst_post</scheme>
<scheme>lsm_ruc</scheme>
<scheme>lsm_ruc_sfc_sice_pre</scheme>
<scheme>sfc_sice</scheme>
<scheme>lsm_ruc_sfc_sice_post</scheme>
<scheme>GFS_surface_loop_control_part2</scheme>
</subcycle>
<!-- End of surface iteration loop -->
Expand All @@ -93,9 +96,9 @@ The GSD_v1 physics suite uses the parameterizations in the following order:
<scheme>GFS_suite_stateout_update</scheme>
<scheme>ozphys_2015</scheme>
<scheme>h2ophys</scheme>
<scheme>GFS_DCNV_generic_pre</scheme>
<scheme>get_phi_fv3</scheme>
<scheme>GFS_suite_interstitial_3</scheme>
<scheme>GFS_DCNV_generic_pre</scheme>
<scheme>cu_gf_driver_pre</scheme>
<scheme>cu_gf_driver</scheme>
<scheme>GFS_DCNV_generic_post</scheme>
Expand All @@ -110,6 +113,7 @@ The GSD_v1 physics suite uses the parameterizations in the following order:
<scheme>GFS_MP_generic_post</scheme>
<scheme>cu_gf_driver_post</scheme>
<scheme>maximum_hourly_diagnostics</scheme>
<scheme>phys_tend</scheme>
</subcycle>
</group>
<!-- <finalize></finalize> -->
Expand Down
2 changes: 1 addition & 1 deletion physics/docs/pdftxt/RRFS_v1alpha_suite.txt
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Expand Up @@ -24,7 +24,7 @@ The RRFS_v1alpha physics suite uses the parameterizations in the following order
\code
<?xml version="1.0" encoding="UTF-8"?>

<suite name="FV3_RRFS_v1alpha" lib="ccppphys" ver="5">
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<suite name="FV3_RRFS_v1alpha" version="1">
<!-- <init></init> -->
<group name="time_vary">
<subcycle loop="1">
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6 changes: 3 additions & 3 deletions physics/docs/pdftxt/suite_input.nml.txt
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Expand Up @@ -269,14 +269,14 @@ show some variables in the namelist that must match the SDF.
</ul>
<td>0
<tr><td>bl_mynn_edmf_part <td>mynnedmf_wrapper <td>flag to partitioning the MF and ED areas <td>0
<tr><td>bl_mynn_edmf_tkeadvect <td>mynnedmf_wrapper <td>activate computation of TKE advection (not yet in use for FV3) \n
<tr><td>bl_mynn_tkeadvect <td>mynnedmf_wrapper <td>activate computation of TKE advection (not yet in use for FV3) \n
<ul>
<li> false: deactivate TKE advection
<li> true: activate TKE advection
</ul>
<td>.false.
<tr><td>bl_mynn_edmf_tkebudget <td>mynnedmf_wrapper <td>flag to activate TKE budget <td>0
<tr><td>bl_mynn_edmf_cloudpdf <td>mynnedmf_wrapper <td>flag to determine which cloud PDF to use \n
<tr><td>bl_mynn_tkebudget <td>mynnedmf_wrapper <td>flag to activate TKE budget <td>0
<tr><td>bl_mynn_cloudpdf <td>mynnedmf_wrapper <td>flag to determine which cloud PDF to use \n
<ul>
<li> 0: use Sommeria-Deardorff subgrid cloud PDF
<li> 1: use Kuwano-Yoshida subgrid cloud PDF
Expand Down