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DNA web app for viewing msporny's genome.
lysdexia/MSPornyDNA
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All files in this repository released under Creative Commons share-alike license: http://creativecommons.org/licenses/by-sa/2.5/ Set up couchdb. (on ubuntu, apt-get install couchdb) Install python couchdb module (easy_install couchdb) Do a git checkout of msporny's genome https://github.com/msporny/dna Edit dna/ManuSporny-genome.txt Delete all comments down to header line: # "#rsid chromosome position genotype" # then remove hash symbol Save dna/ManuSporny-genome.txt as dna/ManuSporny-genome.csv Edit load_genome.ini to reflect your setup. If you have set up couchdb running on localhost in "admin party" mode (i.e. you have set no admins) then load_genome.ini should be fine the way it is. Run load_genome.py like so: ./load_genome.py -f /path/to/csvfile -n databasename The script automatically installs a test view for you to play with. Have fun! Doug Shawhan
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