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  1. pipelines pipelines Public

    Pipelines for processing malaria parasite and mosquito genome sequence data.

    WDL 14 13

  2. malariagen-data-python malariagen-data-python Public

    Analyse MalariaGEN data from Python

    Python 13 23

  3. vector-data vector-data Public

    Documentation, discussion forum and issue tracker for malaria vector genomic data released by MalariaGEN.

    7 3

  4. GeneticReportCard GeneticReportCard Public

    Genetic Report Card code

    Java 4 1

  5. ano-spp ano-spp Public

    A targeted amplicon sequencing panel to simultaneously identify mosquito species and Plasmodium presence across the entire Anopheles genus

    Jupyter Notebook 3

  6. agam-selection-atlas agam-selection-atlas Public

    Ag1000G selection atlas

    Jupyter Notebook 2 1

Repositories

Showing 10 of 53 repositories
  • vobs-updates Public

    Minisite with technical updates from the Malaria Vector Genome Observatory.

    malariagen/vobs-updates’s past year of commit activity
    Jupyter Notebook 0 CC0-1.0 0 3 0 Updated Sep 9, 2024
  • vector-data Public

    Documentation, discussion forum and issue tracker for malaria vector genomic data released by MalariaGEN.

    malariagen/vector-data’s past year of commit activity
    7 3 12 0 Updated Sep 9, 2024
  • anospp-analysis Public

    Python package for ANOSPP data analysis

    malariagen/anospp-analysis’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Sep 6, 2024
  • malariagen-data-python Public

    Analyse MalariaGEN data from Python

    malariagen/malariagen-data-python’s past year of commit activity
    Python 13 MIT 23 70 (2 issues need help) 5 Updated Sep 5, 2024
  • malariagen/pf-haploatlas’s past year of commit activity
    Python 1 MIT 1 15 0 Updated Aug 29, 2024
  • malariagen/mali-analysis-paper’s past year of commit activity
    HTML 0 CC-BY-4.0 0 0 1 Updated Aug 19, 2024
  • malariagen/streamlit-plotly-events2’s past year of commit activity
    Python 0 Apache-2.0 218 0 0 Updated Jun 28, 2024
  • grcMalaria Public

    Tools for processing and analyzing SpotMalaria Genetic Report Cards

    malariagen/grcMalaria’s past year of commit activity
    R 2 2 3 1 Updated Jun 26, 2024
  • mgenv Public

    Repository with installation scripts and environment definitions for conda and texlive, for standardising environments across the MalariaGEN resource centre team.

    malariagen/mgenv’s past year of commit activity
    Shell 1 MIT 5 4 0 Updated Jun 21, 2024
  • parasite-data Public

    Documentation, discussion forum and issue tracker for malaria parasite genomic data released by MalariaGEN.

    malariagen/parasite-data’s past year of commit activity
    0 0 4 0 Updated Jun 4, 2024

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