Speedup FrametoArray serializer for ChunkStore #909
Merged
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Summary
Speedup FrametoArray serializer for ChunkStore by removing intermediate DataFrame construction.
The majority of the time spent for serialization is spent on the following:
By removing the intermediate DataFrame construction (so we only use numpy arrays and construct the DataFrame at the very end) and constructing the index separately, we can speed the serialization up significantly.
Performance comparisons
No Index - Series
With Index - Series
No Index - Multiple columns
Single chunk (shape: (100, 4))
Multiple chunks (data in list):
With Index - Multiple columns
Single chunk (shape: (100, 4))
Multiple chunks (data in list):