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Update DOT parser to optionally allow edge IDs in labels
externalbug
Bugs with other libraries/dependencies
#246
opened Jul 5, 2024 by
fedarko
Adjust max node / max edge counts to consider the top layer of the decomposed graph
lowpriorityfeature
#245
opened May 26, 2023 by
fedarko
Support general node / edge metadata
highpriorityfeature
#243
opened Apr 13, 2023 by
fedarko
16 tasks
Identify cyclic frayed ropes?
hierarchical decomposition
it took me a year to implement this so it had better be useful .___.
lowpriorityfeature
#242
opened Apr 11, 2023 by
fedarko
Identifying cyclic bubbles?
hierarchical decomposition
it took me a year to implement this so it had better be useful .___.
note
#241
opened Apr 11, 2023 by
fedarko
6 of 9 tasks
Draw arrowheads in both directions for self-implying edges
lowpriorityfeature
#240
opened Mar 31, 2023 by
fedarko
Support duplicate (aka parallel) edges in GFA / FASTG files?
lowpriorityfeature
#239
opened Mar 31, 2023 by
fedarko
2 tasks
Pass extra GFA segment / link attributes (tags) to the visualization
lowpriorityfeature
#238
opened Mar 30, 2023 by
fedarko
Compress main.js more
vieweroptimization
Optimizations for the viewer interface
#237
opened Mar 9, 2023 by
fedarko
Thicken duplicate edges
bug
hierarchical decomposition
it took me a year to implement this so it had better be useful .___.
#231
opened Apr 29, 2022 by
fedarko
Allow searching to return complements if needed
lowpriorityfeature
#230
opened Apr 21, 2022 by
fedarko
Pass PATTERN2COLOR from Python to JS?
codeissue
Not quite bugs, but still issues with the code (e.g. style)
#228
opened Apr 21, 2022 by
fedarko
Blurry exported screenshots
bug
externalbug
Bugs with other libraries/dependencies
#226
opened Mar 21, 2022 by
fedarko
Aggregate some statistics in node / edge tables
lowpriorityfeature
#224
opened Mar 14, 2022 by
fedarko
New type of pattern: bipartite subgraphs
hierarchical decomposition
it took me a year to implement this so it had better be useful .___.
highpriorityfeature
#222
opened Mar 9, 2022 by
fedarko
Prevent long node labels from extending past pattern boundaries
bug
lowpriorityfeature
#220
opened Mar 1, 2022 by
fedarko
Better selected node/edge/pattern info tables
lowpriorityfeature
#219
opened Feb 26, 2022 by
fedarko
Sanity check with various assemblers' output
administrative
Usually non-code-related issues we need to take care of
documentation
#216
opened Feb 22, 2022 by
fedarko
Documenting gaps in AGP scaffolds
futureideas
lowpriorityfeature
#212
opened Feb 22, 2022 by
fedarko
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