T2T-Browser

UCSC Genome browser hub for the T2T genomes and resources

Links to the browser

• Stable Release version (Recommended)

  • Hub Connect: US | Euro | Asia
  • Hub gateway: US | Euro | Asia
  • Hub URL: https://research.nhgri.nih.gov/CustomTracks/T2T_hubs/T2Tgenomes/hub.txt

• Developmental version

  • Hub Connect: US | Euro | Asia
  • Hub gateway: US | Euro | Asia
  • Hub URL: https://research.nhgri.nih.gov/CustomTracks/T2T_hubs/T2T_test/hub.txt

What's in the browser

Latest tracks made publicly available for the following genomes:

• T2T-CHM13v2.0
• mGorGor1_v2.0
• mPanPan1_v2.0
• mPanTro3_v2.0
• mPonAbe1_v2.0
• mPonPyg2_v2.0
• mSymSyn1_v2.0
• HG002v1.0.1.MAT
• HG002v1.0.1.PAT
• HG002v1.1.MAT
• HG002v1.1.PAT

For convenience, the non-human primate genome browsers are available for its primary assembly versions as well in addition to the diploid version.

Additional browser links

• Genome Archive GenArk: Automatically built by UCSC Genome Browser for each NCBI genomes
• Legacy T2T-CHM13 browsers: v1.0 | v1.1
• GenArk version of T2T-CHM13v2.0