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Usefull tools for image mosaics analysis and faunal annotation processing

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marinmarcillat/CHUBACAPP

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CHUBACAPP

Python 3.10 sphinx docs

Welcome ! Chubacapp is a toolbox to process images, 3D models and annotation data from ROV and AUV.

Main features:

  • Annotation reprojection on 3D models to get precisely geolocated 3D annotations
  • 3D annotation viewer
  • YoloV5 inference and export to Biigle via API
  • Disjoint image selection using 3D model and image imprint reprojection
  • 3D topographic metrics calculation from 3D models

It contains usefull tools for image mosaics analysis and faunal annotation processing, as part of a complete process pipeline to treat underwater imaging transects. A methodological paper is in preparation, and will be added here after publishing.

Documentation: Chubacapp (The documentation can be buggy, please reload or download pdf if you have any issues)

Process pipeline:

process_pipeline

A complete documentation on the different steps of the pipeline is also in preparation.

To download Matisse3D (2D and 3D mosaics): Matisse3D

To download 3D Metrics (3D models and annotations visualization): 3D Metrics

Installation

The installation requires anaconda's latest version.

Launch the installation .exe file. It will install the required conda environment.

Using the chubacapp interface

Launch with launch.bat

Please refer to the documentation pdf for more information.

Contact: marinmarcillat@gmail.com