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Editing datascript for Olmsted#17, Olmsted#11, scons for Olmsted#13 #249

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merged 9 commits into from
Sep 25, 2018

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eharkins
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@eharkins eharkins commented Sep 6, 2018

matsengrp/olmsted#17

Not sure why the first two commits are supposedly different from the PR you already merged, the third commit is 0 changes, the last one is why I am making this PR

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Latest commit adds potential fix for matsengrp/olmsted#13

@eharkins eharkins changed the title adding nt sequences for Olmsted#17 adding nt sequences for Olmsted#17, filtering seed lineage seqs for Olmsted#13 Sep 10, 2018
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records = []
leaves_counter = 1
for n in tree.traverse('postorder'):
n.label = n.id = n.name
n.type = "node"
n.nt_seq = nt_seqs_dict[n.name]
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@eharkins Mmm... here too. Please convert all tabs to spaces if that's what's going on.

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Done

@eharkins eharkins changed the title adding nt sequences for Olmsted#17, filtering seed lineage seqs for Olmsted#13 Editing datascript for Olmsted#17, Olmsted#11, Scons fot Olmsted#13 Sep 25, 2018
@eharkins eharkins changed the title Editing datascript for Olmsted#17, Olmsted#11, Scons fot Olmsted#13 Editing datascript for Olmsted#17, Olmsted#11, scons for Olmsted#13 Sep 25, 2018
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Looks good! Thanks.

'tripl': tripl_version,
#'nestly': lambda: nestly.__version__,
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This may seem like minutia, but can you please comment in this style in python (and in js as well actually)? There's a nice vim plugin for letting you comment things out like this: https://github.com/scrooloose/nerdcommenter.

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2 participants