renaming deploy config as main.yml

.github/workflows/main.yml

@@ -0,0 +1,81 @@
+name: Rintro2HTML
+run-name: ${{ github.actor }} is testing
+
+on:
+  push:
+    branches: ["2024.04"] 
+
+
+jobs:
+
+  build:
+    name: Conda Tests
+    runs-on: ubuntu-latest
+    defaults:
+       run:
+         shell: bash -l {0}
+    container: node:latest
+
+    steps:
+      - name: Print shell information
+        run: |
+          echo "Shell: $SHELL"
+          echo "Shell version: $($SHELL --version)"
+          uname -a || true
+
+      - uses: actions/checkout@v4
+      - name: Check yaml
+        run: |
+          cat configs/conda.yml || true
+
+      - name: Install Conda environment with Micromamba
+        uses: mamba-org/setup-micromamba@main
+        with:
+          environment-file: configs/conda.yml
+
+      - name: List Available Environment
+        shell: bash -l {0}
+        run: micromamba list
+
+      - name: Activate Environment
+        run: micromamba activate Rintro
+
+      - name: Check Installation
+        run: |
+          echo "after conda activate Rintro: PATH=$PATH;"
+          which R || true
+          R --version || true
+
+      - name: Installation non-conda packages 
+        run: |
+          Rscript -e 'install.packages(c("KernSmooth"), repos="https://cloud.r-project.org")'
+
+      - name: Inspect .libPaths
+        run: |
+          Rscript -e '.libPaths()'     
+
+      - name: Render quarto
+        # continue-on-error: true # only for error tracking
+        run: |
+          quarto render
+
+      - name: Show all files in docs
+        run: ls -Ral docs
+
+      - name: Show file contents
+        run: | 
+          cat docs/index.html
+
+      - name: Upload
+        uses: actions/upload-pages-artifact@v3
+        with:
+          path: ./docs
+
+      - name: Deploy to GitHub Pages
+        uses: peaceiris/actions-gh-pages@v3
+        if: ${{ !env.ACT }}
+        with:
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          publish_dir: |
+            ./docs
+