Merge pull request nf-core#160 from nf-core/fix_sra_ftp_aws_public_co…

…ntainer fix: container images for AWS corrected
maxulysse · May 16, 2023 · 1b9d187 · 1b9d187
2 parents 7a5417d + 255190e
commit 1b9d187
Showing 1 changed file with 9 additions and 0 deletions.
diff --git a/conf/public_aws_ecr.config b/conf/public_aws_ecr.config
@@ -12,6 +12,15 @@ docker.registry = 'public.ecr.aws'
 podman.registry = 'public.ecr.aws'
 
 process {
+    withName: '.*:SRA_IDS_TO_RUNINFO' {
+        container = 'quay.io/biocontainers/python:3.9--1'
+    }
+    withName: '.*:SRA_RUNINFO_TO_FTP' {
+        container = 'quay.io/biocontainers/python:3.9--1'
+    }
+    withName: '.*:MULTIQC_MAPPINGS_CONFIG' {
+        container = 'quay.io/biocontainers/python:3.9--1'
+    }
     withName: '.*:SRATOOLS_FASTERQDUMP' {
         container = 'quay.io/biocontainers/mulled-v2-5f89fe0cd045cb1d615630b9261a1d17943a9b6a:6a9ff0e76ec016c3d0d27e0c0d362339f2d787e6-0'
     }