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Bayesian_SSUR

Dependencies

This software has been tested on UNIX systems only, on Windows it might work using Bash for Windows under the assumption that a recent version of the gcc compiler is available. It depends heavily on Armadillo ( http://arma.sourceforge.net/ ) and on some boost libraryes ( https://boost.org ). See the projects respective pages for installation.

Usage

Run the sample_conformant_data.R script to simulate some synthetic data. This will produce a bash script to call the program on those data as well; results will be presented in a 'results' subdirectory.

As prompted by the script, to run simply input

make && chmod +x call.sh && ./call.sh

in the console. Run

make clean

to cleanup. NOTE THIS WILL ERASE THE RESULTS AS WELL.

Reference pre-print

https://www.biorxiv.org/content/early/2018/11/11/467019

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MCMC sampler for Sparse SUR model

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