chore: update webr and devcontainer setup

.devcontainer/devcontainer.json

@@ -1,69 +1,28 @@
-// For format details, see https://aka.ms/devcontainer.json.
-// Base image from https://github.com/devcontainers/images/tree/main/src/base-ubuntu.
 {
-	"name": "Quarto",
-	// "image": "mcr.microsoft.com/devcontainers/base:ubuntu-22.04",
-	"build": {
-		"dockerfile": "./Dockerfile",
-		"context": ".",
-		"args": {
-			"VARIANT": "jammy"
-		}
-	},
-
-	// Uncomment to connect as root instead. More info: https://aka.ms/dev-containers-non-root.
+	"name": "Quarto Codespaces",
+	"image": "ghcr.io/mcanouil/quarto-codespaces:latest",
 	"remoteUser": "vscode",
-
-	// Features to add to the dev container. More info: https://containers.dev/features.
 	"features": {
-		// Setup a non-root user. Note that UID and GID will be updated with local user values.
-		"ghcr.io/devcontainers/features/common-utils:2": {
-			"installZsh": "true",
-			"username": "vscode",
-			"userUid": "1000",
-			"userGid": "1000",
-			"upgradePackages": "true"
-		},
-		// To latest the latest build of Git.
-		"ghcr.io/devcontainers/features/git:1": {
-			"version": "latest",
-			"ppa": "false"
-		},
-		// To install the latest RIG v1.*.
-		"ghcr.io/rocker-org/devcontainer-features/r-rig:1": {
-			"version": "release", // To install the latest R version (default) and other.
-			"vscodeRSupport": "full",
-			"installDevTools": "false",
-			"installREnv": "false",
-			"installRMarkdown": "false"
-		},
-		// To install the latest Python
-		// "ghcr.io/devcontainers/features/python:1": {
-		// 	"version": "latest"
-		// },
-		// To install the latest Quarto v1.*.
-		"ghcr.io/rocker-org/devcontainer-features/quarto-cli:1": {
-			"version": "prerelease",
-			"installTinyTex": "false",
-			"installChromium": "true"
-		}
+		// "ghcr.io/rocker-org/devcontainer-features/quarto-cli:1": {
+		// 	"version": "prerelease",
+		// 	"installTinyTex": "false",
+		// 	"installChromium": "false"
+		// }
 	},
-
-	// Configure tool-specific properties.
 	"customizations": {
 		"vscode": {
 			"extensions": [
 				"quarto.quarto",
-				"REditorSupport.r",
-				"usernamehw.errorlens"
+				"REditorSupport.r"
 			],
 			"settings": {
 				"r.rterm.option": [
 					"--no-save",
 					"--no-restore-data",
 					"--quiet"
-				]
+				],
+				"r.useRenvLibPath": true
 			}
 		}
-	},
+	}
 }

_extensions/coatless/webr/_extension.yml

@@ -1,7 +1,7 @@
 name: webr
 title: Embedded webr code cells
 author: James Joseph Balamuta
-version: 0.3.6
+version: 0.3.9
 quarto-required: ">=1.2.198"
 contributes:
   filters:

_extensions/coatless/webr/webr-serviceworker.js

@@ -1 +1 @@
-importScripts('https://webr.r-wasm.org/v0.2.1/webr-serviceworker.js');
+importScripts('https://webr.r-wasm.org/v0.2.2/webr-serviceworker.js');

_extensions/coatless/webr/webr-worker.js

@@ -1 +1 @@
-importScripts('https://webr.r-wasm.org/v0.2.1/webr-worker.js');
+importScripts('https://webr.r-wasm.org/v0.2.2/webr-worker.js');

_extensions/coatless/webr/webr.lua

@@ -9,7 +9,7 @@ local hasDoneWebRSetup = false
 -- https://docs.r-wasm.org/webr/latest/api/js/interfaces/WebR.WebROptions.html
 
 -- Define a base compatibile version
-local baseVersionWebR = "0.2.1"
+local baseVersionWebR = "0.2.2"
 
 -- Define where WebR can be found
 local baseUrl = "https://webr.r-wasm.org/v".. baseVersionWebR .."/"
@@ -33,6 +33,9 @@ local showHeaderMessage = "false"
 
 -- Define an empty string if no packages need to be installed.
 local installRPackagesList = "''"
+
+-- Define whether R packages should automatically be loaded
+local autoloadRPackages = "true"
 ----
 
 --- Setup variables for tracking number of code cells
@@ -105,9 +108,9 @@ function setWebRInitializationOptions(meta)
   -- https://docs.r-wasm.org/webr/latest/api/js/interfaces/WebR.WebROptions.html#channeltype
   if not is_variable_empty(webr["channel-type"]) then
     channelType = convertMetaChannelTypeToWebROption(pandoc.utils.stringify(webr["channel-type"]))
-    if not (channelType == "ChannelType.Automatic" and channelType == "ChannelType.ServiceWorker") then
-      hasServiceWorkerFiles = false
-    end
+
+    -- Starting from webR v0.2.2, service workers are only deployed when explicitly requested.
+    hasServiceWorkerFiles = (channelType == "ChannelType.ServiceWorker")
   end
 
   -- The base URL from where to load JavaScript worker scripts when loading webR
@@ -150,6 +153,11 @@ function setWebRInitializationOptions(meta)
     end
 
     installRPackagesList = table.concat(package_list, ", ")
+
+    if not is_variable_empty(webr['autoload-packages']) then
+      autoloadRPackages = pandoc.utils.stringify(webr["autoload-packages"])
+    end
+
   end
 
 
@@ -292,7 +300,8 @@ function initializationWebR()
     ["CHANNELTYPE"] = channelType,
     ["SERVICEWORKERURL"] = serviceWorkerUrl, 
     ["HOMEDIR"] = homeDir,
-    ["INSTALLRPACKAGESLIST"] = installRPackagesList
+    ["INSTALLRPACKAGESLIST"] = installRPackagesList,
+    ["AUTOLOADRPACKAGES"] = autoloadRPackages
     -- ["VERSION"] = baseVersionWebR
   }
 

demo/Blog/posts/post-with-code/index.qmd

@@ -1,7 +1,7 @@
 ---
 title: "Post With Code"
 author: "Harlow Malloc"
-date: "2023-10-20"
+date: "2023-11-22"
 categories: [news, code, analysis]
 image: "image.jpg"
 ---

demo/Blog/posts/welcome/index.qmd

@@ -1,7 +1,7 @@
 ---
 title: "Welcome To My Blog"
 author: "Tristan O'Malley"
-date: "2023-10-17"
+date: "2023-11-19"
 categories: [news]
 ---
 

demo/Book/_quarto.yml

@@ -4,7 +4,7 @@ project:
 book:
   title: "Book"
   author: "Norah Jones"
-  date: "10/20/2023"
+  date: "11/22/2023"
   chapters:
     - index.qmd
     - intro.qmd

gentle-intro-to-quarto.qmd

@@ -18,6 +18,8 @@ filters:
 resources:
   - webr-serviceworker.js
   - webr-worker.js
+webr: 
+  show-startup-message: false
 ---
 
 ::: {.content-visible when-profile="rlille"}

poster.r

@@ -2,5 +2,6 @@ webshot2::webshot(
   url = "gentle-intro-to-quarto.html",
   file = "gentle-intro-to-quarto.png",
   vwidth = 1920,
-  vheight = 1080
+  vheight = 1080,
+  delay = 1
 )

quarto-extensions.sh

@@ -3,3 +3,4 @@
 quarto add mcanouil/quarto-revealjs-coeos@v1.3.0
 quarto add mcanouil/quarto-iconify@v1.0.7
 quarto add quarto-ext/attribution@main
+quarto add coatless/quarto-webr@0.3.9

webr-serviceworker.js

@@ -1 +1 @@
-importScripts('https://webr.r-wasm.org/v0.2.1/webr-serviceworker.js');
+importScripts('https://webr.r-wasm.org/v0.2.2/webr-serviceworker.js');

webr-worker.js

@@ -1 +1 @@
-importScripts('https://webr.r-wasm.org/v0.2.1/webr-worker.js');
+importScripts('https://webr.r-wasm.org/v0.2.2/webr-worker.js');