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.mvn | ||
.idea/ | ||
cache | ||
target | ||
/ontology/mapping.zip |
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22 changes: 22 additions & 0 deletions
22
src/main/java/de/medizininformatikinitiative/flare/model/mapping/MappingTreeBase.java
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package de.medizininformatikinitiative.flare.model.mapping; | ||
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import de.medizininformatikinitiative.flare.model.sq.ContextualTermCode; | ||
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import java.util.List; | ||
import java.util.stream.Stream; | ||
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public record MappingTreeBase(List<MappingTreeModuleRoot> moduleRoots) { | ||
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public Stream<ContextualTermCode> expand(ContextualTermCode termCode) { | ||
var key = termCode.termCode().code(); | ||
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return moduleRoots.stream().flatMap(moduleRoot -> | ||
isModuleMatching(termCode, moduleRoot) ? moduleRoot.expand(key) : Stream.empty()); | ||
} | ||
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private boolean isModuleMatching(ContextualTermCode termCode, MappingTreeModuleRoot moduleRoot) { | ||
return termCode.context().equals(moduleRoot.context()) && | ||
moduleRoot.system().equals(termCode.termCode().system()) && | ||
moduleRoot.entries().containsKey(termCode.termCode().code()); | ||
} | ||
} |
16 changes: 16 additions & 0 deletions
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src/main/java/de/medizininformatikinitiative/flare/model/mapping/MappingTreeModuleEntry.java
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package de.medizininformatikinitiative.flare.model.mapping; | ||
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import com.fasterxml.jackson.annotation.JsonCreator; | ||
import com.fasterxml.jackson.annotation.JsonIgnoreProperties; | ||
import com.fasterxml.jackson.annotation.JsonProperty; | ||
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import java.util.List; | ||
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@JsonIgnoreProperties(ignoreUnknown = true) | ||
record MappingTreeModuleEntry(String key, List<String> children) { | ||
@JsonCreator | ||
static MappingTreeModuleEntry fromJson(@JsonProperty("key") String key, | ||
@JsonProperty("children") List<String> children) { | ||
return new MappingTreeModuleEntry(key, children); | ||
} | ||
} |
34 changes: 34 additions & 0 deletions
34
src/main/java/de/medizininformatikinitiative/flare/model/mapping/MappingTreeModuleRoot.java
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package de.medizininformatikinitiative.flare.model.mapping; | ||
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import com.fasterxml.jackson.annotation.JsonCreator; | ||
import com.fasterxml.jackson.annotation.JsonIgnoreProperties; | ||
import com.fasterxml.jackson.annotation.JsonProperty; | ||
import de.medizininformatikinitiative.flare.model.sq.ContextualTermCode; | ||
import de.medizininformatikinitiative.flare.model.sq.TermCode; | ||
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import java.util.List; | ||
import java.util.Map; | ||
import java.util.stream.Collectors; | ||
import java.util.stream.Stream; | ||
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import static java.util.function.Function.identity; | ||
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@JsonIgnoreProperties(ignoreUnknown = true) | ||
public record MappingTreeModuleRoot(TermCode context, String system, Map<String, MappingTreeModuleEntry> entries) { | ||
@JsonCreator | ||
static MappingTreeModuleRoot fromJson(@JsonProperty("context") TermCode context, | ||
@JsonProperty("system") String system, | ||
@JsonProperty("entries") List<MappingTreeModuleEntry> entries) { | ||
return new MappingTreeModuleRoot( | ||
context, | ||
system, | ||
entries.stream().collect(Collectors.toMap(MappingTreeModuleEntry::key, identity()))); | ||
} | ||
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public Stream<ContextualTermCode> expand(String key) { | ||
var newTermCode = new ContextualTermCode(context, new TermCode(system, key, "")); | ||
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return Stream.concat(Stream.of(newTermCode), entries.get(key).children().stream().flatMap(this::expand)); | ||
} | ||
} |
99 changes: 0 additions & 99 deletions
99
src/main/java/de/medizininformatikinitiative/flare/model/mapping/TermCodeNode.java
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