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Backport PR spacetelescope#2797: ensure footprints display when added…
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… before linking
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gibsongreen authored and meeseeksmachine committed Apr 17, 2024
1 parent c891f79 commit 29fb270
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Showing 3 changed files with 74 additions and 18 deletions.
4 changes: 2 additions & 2 deletions CHANGES.rst
Original file line number Diff line number Diff line change
Expand Up @@ -15,8 +15,8 @@ Cubeviz

Imviz
^^^^^

- Fix a bug where footprints did not overlay when created via API. [#2790]
- Fix bugs where API created footprints did not overlay and only last
footprint displayed if added before linking. [#2790, #2797]

- Improved behavior when orientations are created or selected without having data loaded in the viewer. [#2789]

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46 changes: 30 additions & 16 deletions jdaviz/configs/imviz/plugins/footprints/footprints.py
Original file line number Diff line number Diff line change
Expand Up @@ -185,6 +185,13 @@ def _on_link_type_updated(self, msg=None):
# toggle visibility as necessary
self._on_is_active_changed()

# When footprint(s) are added via API before WCS link. Overlays visibility & is_active
# can be True, but only last footprint will display. This ensures all footprints display
if not self.is_pixel_linked:
for choice in self.overlay.choices:
# trigger the update without actually changing the user-selection
self._change_overlay(overlay_selected=choice, center_the_overlay=False)

def vue_link_by_wcs(self, *args):
# call other plugin so that other options (wcs_use_affine, wcs_use_fallback)
# are retained. Remove this method if support for plotting footprints
Expand Down Expand Up @@ -314,37 +321,43 @@ def vue_center_on_viewer(self, viewer_ref):
self.center_on_viewer(viewer_ref)

@observe('overlay_selected')
def _change_overlay(self, *args):
def _change_overlay(self, *args, overlay_selected=None, center_the_overlay=True):
if not hasattr(self, 'overlay'): # pragma: nocover
# plugin/traitlet startup
return
if self.overlay_selected == '':
# no overlay selected (this can happen when removing all overlays)
return

if self.overlay_selected not in self._overlays:
overlay_selected = overlay_selected if overlay_selected is not None else self.overlay_selected # noqa

if overlay_selected not in self._overlays:
# _on_link_type_updated() called in init but don't want to create
# the default overlay yet, since center_on_viewer() will cause a traceback
if not center_the_overlay:
return
# create new entry with defaults (any defaults not provided here will be carried over
# from the previous selection based on current traitlet values)

# if this is the first overlay, there is a chance the traitlet for color was already set
# to something other than the default, so we want to use that, otherwise for successive
# new overlays, we want to ignore the traitlet and default back to "active" orange.
default_color = '#c75109' if len(self._overlays) else self.color
self._overlays[self.overlay_selected] = {'color': default_color}
self._overlays[overlay_selected] = {'color': default_color}

# similarly, if the user called any import APIs before opening the plugin, we want to
# respect that, but when creating successive overlays, any selection from file/region
# should be cleared for the next selection
if self.preset_selected == 'From File...' and len(self._overlays) > 1:
self._overlays[self.overlay_selected]['from_file'] = ''
self._overlays[self.overlay_selected]['preset'] = self.preset.choices[0]
self._overlays[overlay_selected]['from_file'] = ''
self._overlays[overlay_selected]['preset'] = self.preset.choices[0]

# for the first overlay only, default the position to be centered on the current
# zoom limits of the first selected viewer
if len(self._overlays) == 1 and len(self.viewer.selected):
self.center_on_viewer(self.viewer.selected[0])

fp = self._overlays[self.overlay_selected]
fp = self._overlays[overlay_selected]

# we'll temporarily disable updating the overlays so that we can set all
# traitlets simultaneously (and since we're only updating traitlets to a previously-set
Expand All @@ -365,7 +378,7 @@ def _change_overlay(self, *args):
# dict above.
fp[key] = getattr(self, attr)
self._ignore_traitlet_change = False
self._preset_args_changed()
self._preset_args_changed(overlay_selected=overlay_selected)

def _mark_visible(self, viewer_id, overlay=None):
if not self.is_active:
Expand Down Expand Up @@ -461,24 +474,25 @@ def overlay_regions(self):
return regs

@observe('preset_selected', 'from_file', 'ra', 'dec', 'pa', 'v2_offset', 'v3_offset')
def _preset_args_changed(self, msg={}):
def _preset_args_changed(self, msg={}, overlay_selected=None):
if self._ignore_traitlet_change:
return
if not self.overlay_selected:
overlay_selected = overlay_selected if overlay_selected is not None else self.overlay_selected # noqa
if not overlay_selected:
return

name = msg.get('name', '').split('_selected')[0]

if self.overlay_selected not in self._overlays:
if overlay_selected not in self._overlays:
# default dictionary has not been created yet
return

if len(name):
self._overlays[self.overlay_selected][name] = msg.get('new')
if name == 'from_file' and 'regions' in self._overlays[self.overlay_selected]:
self._overlays[overlay_selected][name] = msg.get('new')
if name == 'from_file' and 'regions' in self._overlays[overlay_selected]:
# then the file may have been changed from the API, so we need to clear the cache
# the cache will then be re-populated on the call to self.overlay_regions below
del self._overlays[self.overlay_selected]['regions']
del self._overlays[overlay_selected]['regions']

regs = self.overlay_regions

Expand All @@ -490,12 +504,12 @@ def _preset_args_changed(self, msg={}):
wcs = getattr(viewer.state.reference_data, 'coords', None)
if wcs is None:
continue
existing_overlays = self._get_marks(viewer, self.overlay_selected)
existing_overlays = self._get_marks(viewer, overlay_selected)
update_existing = len(existing_overlays) == len(regs)
if not update_existing and len(existing_overlays):
# clear any existing marks (length has changed, perhaps a new preset)
viewer.figure.marks = [m for m in viewer.figure.marks
if getattr(m, 'overlay', None) != self.overlay_selected]
if getattr(m, 'overlay', None) != overlay_selected]

# the following logic is adapted from
# https://github.com/spacetelescope/jwst_novt/blob/main/jwst_novt/interact/display.py
Expand Down Expand Up @@ -536,7 +550,7 @@ def _preset_args_changed(self, msg={}):
else:
mark = FootprintOverlay(
viewer,
self.overlay_selected,
overlay_selected,
x=x_coords,
y=y_coords,
colors=[self.color],
Expand Down
42 changes: 42 additions & 0 deletions jdaviz/configs/imviz/tests/test_footprints.py
Original file line number Diff line number Diff line change
Expand Up @@ -7,6 +7,7 @@

from jdaviz.core.marks import FootprintOverlay
from jdaviz.configs.imviz.plugins.footprints.preset_regions import _all_apertures
from astropy.wcs import WCS

pytest.importorskip("pysiaf")

Expand Down Expand Up @@ -142,3 +143,44 @@ def test_user_api(imviz_helper, image_2d_wcs, tmp_path):
assert plugin._obj.is_active is False
viewer_marks = _get_markers_from_viewer(imviz_helper.default_viewer)
assert viewer_marks[0].visible is False


def test_api_after_linking(imviz_helper):
# custom image to enable visual test in a notebook
arr = np.ones((300, 300))
image_2d_wcs = WCS({'CTYPE1': 'RA---TAN', 'CUNIT1': 'deg', 'CDELT1': -0.0002777777778,
'CRPIX1': 1, 'CRVAL1': 337.5202808,
'CTYPE2': 'DEC--TAN', 'CUNIT2': 'deg', 'CDELT2': 0.0002777777778,
'CRPIX2': 1, 'CRVAL2': -20.833333059999998})

viewer = imviz_helper.app.get_viewer_by_id('imviz-0')

ndd = NDData(arr, wcs=image_2d_wcs)
imviz_helper.load_data(ndd)
imviz_helper.load_data(ndd)

plugin = imviz_helper.plugins['Footprints']
with plugin.as_active():

pointing = {'name': ['pt'], 'ra': [337.51], 'dec': [-20.77], 'pa': [0]}
plugin.color = 'green'
plugin.add_overlay(pointing['name'][0])
plugin.ra = pointing['ra'][0]
plugin.dec = pointing['dec'][0]
plugin.pa = pointing['pa'][0]

# when pixel linked are any marks displayed
viewer_marks = _get_markers_from_viewer(viewer)
no_marks_displayed = all(not mark.visible for mark in viewer_marks)
assert no_marks_displayed is True

# link by wcs and retest
imviz_helper.link_data(link_type='wcs')

viewer_marks = _get_markers_from_viewer(viewer)
# distinguish default from custom overlay with color
marks_displayed = any(mark.visible and mark.colors[0] == 'green'
for mark in viewer_marks)

# when wcs linked are any marks displayed
assert marks_displayed is True

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