This repo uses only an RMarkdown script as input. I followed the following tutorial: https://kbroman.org/blog/2019/02/18/omg_binder/
It plots a heatmap after you mapped reads in your samples against bins or genomes you created.
- Launch in RStudio:
Example files included:
MetaG-heatmap-Binder.Rmd- RMarkdown file with R code chunks to plot a heatmap in RStudioinput_matrix_v2.txt- A sample input file where we mapped reads from several samples against MAG bins that we had created.
Example output includes:
- Marian Schmidt: https://orcid.org/0000-0002-2866-4496
- Guillaume Jospin : https://orcid.org/0000-0002-8746-2632
- Laetitia Wilkins: https://orcid.org/0000-0003-3632-2063
- Charles Reid: NA