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Add AMR tabular comparison view. #24

Merged
merged 21 commits into from
Dec 29, 2023
Merged

Add AMR tabular comparison view. #24

merged 21 commits into from
Dec 29, 2023

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njohner
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@njohner njohner commented Dec 19, 2023

With this PR we add a new view for AMR gene comparison between taxons. As there were already several such tabular comparison views and they are all similar, we refactor those views and write them as class-based views to allow for easier code reuse.

Currently the table allows to compare the presence of specific AMR genes and the cells are colored according to the quality of the best hit for a given taxon. I plan to include grouping by class or subclass in the near future.

This PR bases on #23
AMR_tabular_comparison

@njohner njohner changed the title Nj/amr views Add AMR tabular comparison view. Dec 20, 2023
@njohner njohner marked this pull request as ready for review December 20, 2023 13:24
Base automatically changed from nj/resistance to master December 21, 2023 14:04
@njohner njohner merged commit 0775476 into master Dec 29, 2023
@njohner njohner deleted the nj/amr_views branch December 29, 2023 06:30
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