-
Notifications
You must be signed in to change notification settings - Fork 4
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add reference DB and software versions to database. #54
Conversation
14326fd
to
1304cd2
Compare
1304cd2
to
b2dff95
Compare
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
ko_hits, pfam_hits, swissprot_hits, amr_hits,... counts might also change depending the database version
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Yes of course you're right. I'd also thought about that but decided not to change the tests proactively, but adapt them when needed. But it's clear that the tests are a bit fragile...
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Looks good
With this PR we add a new "versions" table to the database and store the versions of the different reference databases used as well as of the AMRFinderPlus software in it. We display that information on the home page of zDB.
Checklist