R Package for Analysis of Data from SNP Bead Chips
install.packages("snpbeadchip")
remotes::install_github("mikldk/snpbeadchip")
Se the "Introduction" vignette, e.g. available online at https://mikldk.github.io/snpbeadchip/articles/introduction.html.
See "omni54manifest" (https://github.com/mikldk/omni54manifest).