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Imputing time-series microbiome abundance profiles with diffusion model

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Name		Name	Last commit message	Last commit date
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CSDI		CSDI
indata		indata
script		script
README.md		README.md

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Imputation of time-series microbiome profiles

A repository of IEEE conference paper titled "Imputing time-series microbiome abundance profiles with diffusion model".

Requirement

Python 3.8
argparse
torch
pandas
numpy
tqdm
pyyaml
sklearn

Acknowledgement

The codes of the diffusion model were developed based on CSDI.

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Imputing time-series microbiome abundance profiles with diffusion model

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