install system dependencies using github action 'r-lib/actions/setup-… #876
evaham1Annotations
10 errors and 16 warnings
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windows-latest (r_4.4 - bioc_devel - image_)
--- re-building 'vignette.Rmd' using rmarkdown
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windows-latest (r_4.4 - bioc_devel - image_)
processing vignette 'vignette.Rmd' failed with diagnostics:
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windows-latest (r_4.4 - bioc_devel - image_)
could not find function "spls"
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windows-latest (r_4.4 - bioc_devel - image_)
Vignette re-building failed.
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windows-latest (r_4.4 - bioc_devel - image_)
Build process failed
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windows-latest (r_4.4 - bioc_devel - image_)
Process completed with exit code 1.
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macOS-latest (r_4.4 - bioc_devel - image_)
R CMD check found WARNINGs
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macOS-latest (r_4.4 - bioc_devel - image_)
Process completed with exit code 1.
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ubuntu-latest (r_4.4 - bioc_devel - image_)
there is no package called ‘rcmdcheck’
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ubuntu-latest (r_4.4 - bioc_devel - image_)
Process completed with exit code 1.
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windows-latest (r_4.4 - bioc_devel - image_)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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windows-latest (r_4.4 - bioc_devel - image_)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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windows-latest (r_4.4 - bioc_devel - image_)
No files were found with the provided path: check. No artifacts will be uploaded.
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windows-latest (r_4.4 - bioc_devel - image_)
Unexpected input(s) 'extra-repositories', valid inputs are ['cache', 'cache-version', 'extra-packages', 'needs', 'packages', 'pak-version', 'working-directory', 'dependencies', 'upgrade', 'lockfile-create-lib', 'install-pandoc', 'pandoc-version', 'install-quarto', 'quarto-version']
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windows-latest (r_4.4 - bioc_devel - image_)
Unexpected input(s) 'extra-repositories', valid inputs are ['cache', 'cache-version', 'extra-packages', 'needs', 'packages', 'pak-version', 'working-directory', 'dependencies', 'upgrade', 'lockfile-create-lib', 'install-pandoc', 'pandoc-version', 'install-quarto', 'quarto-version']
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macOS-latest (r_4.4 - bioc_devel - image_)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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macOS-latest (r_4.4 - bioc_devel - image_)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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macOS-latest (r_4.4 - bioc_devel - image_)
Undocumented code objects:
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macOS-latest (r_4.4 - bioc_devel - image_)
Undocumented code objects:
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macOS-latest (r_4.4 - bioc_devel - image_)
Unexpected input(s) 'extra-repositories', valid inputs are ['cache', 'cache-version', 'extra-packages', 'needs', 'packages', 'pak-version', 'working-directory', 'dependencies', 'upgrade', 'lockfile-create-lib', 'install-pandoc', 'pandoc-version', 'install-quarto', 'quarto-version']
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macOS-latest (r_4.4 - bioc_devel - image_)
Unexpected input(s) 'extra-repositories', valid inputs are ['cache', 'cache-version', 'extra-packages', 'needs', 'packages', 'pak-version', 'working-directory', 'dependencies', 'upgrade', 'lockfile-create-lib', 'install-pandoc', 'pandoc-version', 'install-quarto', 'quarto-version']
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ubuntu-latest (r_4.4 - bioc_devel - image_)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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ubuntu-latest (r_4.4 - bioc_devel - image_)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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ubuntu-latest (r_4.4 - bioc_devel - image_)
Unexpected input(s) 'extra-repositories', valid inputs are ['cache', 'cache-version', 'extra-packages', 'needs', 'packages', 'pak-version', 'working-directory', 'dependencies', 'upgrade', 'lockfile-create-lib', 'install-pandoc', 'pandoc-version', 'install-quarto', 'quarto-version']
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ubuntu-latest (r_4.4 - bioc_devel - image_)
No files were found with the provided path: check. No artifacts will be uploaded.
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ubuntu-latest (r_4.4 - bioc_devel - image_)
Unexpected input(s) 'extra-repositories', valid inputs are ['cache', 'cache-version', 'extra-packages', 'needs', 'packages', 'pak-version', 'working-directory', 'dependencies', 'upgrade', 'lockfile-create-lib', 'install-pandoc', 'pandoc-version', 'install-quarto', 'quarto-version']
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Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
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macOS-r4.4-results
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61.2 MB |
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