Skip to content

Commit

Permalink
debug: comment out install system dependencies using 'sysreqs' as thi…
Browse files Browse the repository at this point in the history
…s API no longer works
  • Loading branch information
evaham1 committed Sep 24, 2024
1 parent 3879721 commit 437b1b8
Showing 1 changed file with 9 additions and 12 deletions.
21 changes: 9 additions & 12 deletions .github/workflows/actions.yml
Original file line number Diff line number Diff line change
Expand Up @@ -124,18 +124,15 @@ jobs:
key: ${{ runner.os }}-r-${{ matrix.config.r }}-bioc-${{ matrix.config.bioc }}-${{ hashFiles('depends.Rds') }}
restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-bioc-${{ matrix.config.bioc }}-

- name: Update CA Certificates
run: sudo apt-get update && sudo apt-get install -y ca-certificates

- name: Install system dependencies 🔧
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"
sudo apt-get update && sudo apt-get -y install libcurl4-openssl-dev
# - name: Install system dependencies 🔧
# if: runner.os == 'Linux'
# env:
# RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
# run: |
# Rscript -e "remotes::install_github('r-hub/sysreqs')"
# sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
# sudo -s eval "$sysreqs"
# sudo apt-get update && sudo apt-get -y install libcurl4-openssl-dev

- name: Install dependencies 🔨
run: |
Expand Down

0 comments on commit 437b1b8

Please sign in to comment.