Increased the timeouts to handle long PDFs gracefully

[enoriega]

Fixes #476

[enoriega]

@kwalcock Tested the docker image built locally and works!

[kwalcock]

It looks very good to me. I read some of the assertions about the timeout not being respected in dev mode, and it looks like you found the solution. Thanks for getting to it before I did.

Does 40 minutes processing time indicate some other problem?

The CI has been failing on the docker container for me as well.

[enoriega]

@kwalcock The 40 mins is just some arbitrary value, long enough to process a paper with many dozens of pages and accounting for COSMOS processing time.

CI is failing for something apparently unrelated. Not sure yet how to fix it

[enoriega]

@myedibleenso @kwalcock It seems that there is an issue in the free disk (aggressively) action of the GitHub workflow where it can't access an ubuntu repository correctly. I tried a couple variants of a fix I found online, but didn't succeed on fixing it. Do you have any leads on how to fix it?

[myedibleenso]

I think the CI issue is the same one reported here: jlumbroso/free-disk-space#9

... and this open PR fixes it: jlumbroso/free-disk-space#8

That one has been open for awhile. Why don't we try using the fork with the fix.

To do so in this case, I believe we just need to change the action name from jlumbroso/free-disk-space@<tag> to kfir4444/free-disk-space@main. Can you give that a shot, @enoriega ?

[enoriega]

@myedibleenso Testing after applying the fix