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Adding tests for transforms (and minimally easing the API for transforms too with a standardized config file definition) #59

Merged
merged 13 commits into from
Jul 25, 2024
Merged

Adding tests for transforms (and minimally easing the API for transforms too with a standardized config file definition) #59

merged 13 commits into from
Jul 25, 2024

Commits on Jul 23, 2024

  1. start with a little cleanup for config paths before testing.

    @mmcdermott
    mmcdermott committed Jul 23, 2024
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Commits on Jul 24, 2024

  1. Added starting code for integration test landscape for transforms

    @mmcdermott
    mmcdermott committed Jul 24, 2024
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  2. Added an integration test for filter measurements and further improve… 

    …d the interface.
    @mmcdermott
    mmcdermott committed Jul 24, 2024
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  3. Added forgotten test file and added tests for filtering patients, als… 

    …o added tests to verify that nulls don't over-count as unique values.
    @mmcdermott
    mmcdermott committed Jul 24, 2024
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  4. Test filter patients should be failing, not passing -- need to assess… 

    … why.
    @mmcdermott
    mmcdermott committed Jul 24, 2024
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  5. Added starter code for adding time derived measurements

    @mmcdermott
    mmcdermott committed Jul 24, 2024
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Commits on Jul 25, 2024

  1. Add time derived measurements test is failing.

    @mmcdermott
    mmcdermott committed Jul 25, 2024
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  2. Fixed circular import error by renaming troublesome 'tokenize' file t… 

    …o 'tokenization'
    @mmcdermott
    mmcdermott committed Jul 25, 2024
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  3. Fixed time-derived test.

    @mmcdermott
    mmcdermott committed Jul 25, 2024
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  4. Added a normalization test and ensured normalization output remained … 

    …sorted.
    @mmcdermott
    mmcdermott committed Jul 25, 2024
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  5. Fixed occlude outliers script setup and added test.

    @mmcdermott
    mmcdermott committed Jul 25, 2024
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  6. Added a tokenization test.

    @mmcdermott
    mmcdermott committed Jul 25, 2024
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  7. Added tensorization test.

    @mmcdermott
    mmcdermott committed Jul 25, 2024
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