readme update

README.md

@@ -7,40 +7,53 @@ Raw data may be found in [this repository](https://doi.org/10.25824/redu/EP4NGO)
 It is worth noting that the results from my thesis have been revisited and I refer readers to the manuscripts for updated results of the project.
 
 ## Related publications
-Oliveira MPG de, Zorzeto-Cesar TQ, Attux RR de F, Rodrigues LHA. Can accuracy issues of low-cost sensor measurements be overcome with data assimilation?. Eng Agríc. 2023; 43(2):e20220170. Available from: https://doi.org/10.1590/1809-4430-Eng.Agric.v43n2e20220170/2023
+### Journal articles
+Oliveira, M.P.G. de, Zorzeto-Cesar, T.Q., Nóia Júnior, R. de S., Wallach, D., Asseng, S., Rodrigues, L.H.A., 2024. Uncertainty in greenhouse tomato growth models. Comput. Electron. Agric. 225, 109324. https://doi.org/10.1016/j.compag.2024.109324
 
-Monique Oliveira and Luiz Rodrigues. Data assimilation in crop models: old experiences in new contexts. In: Anais do XIV Congresso Brasileiro de Agroinformática, novembro 10, 2023, Natal/RN. Porto Alegre: Sociedade Brasileira de Computação. DOI: https://doi.org/10.5753/sbiagro.2023.26539. 
+Oliveira MPG de, Zorzeto-Cesar TQ, Attux RR de F, Rodrigues LHA. Can accuracy issues of low-cost sensor measurements be overcome with data assimilation?. Eng Agríc. 2023; 43(2):e20220170. https://doi.org/10.1590/1809-4430-Eng.Agric.v43n2e20220170/2023
 
-Monique Oliveira and Luiz Rodrigues. 2021. Monitoramento de plantas em casas de vegetação para assimilação de dados. In: Anais do XIII Congresso Brasileiro de Agroinformática, novembro 10, 2021, Evento Online, Brasil. Porto Alegre: Sociedade Brasileira de Computação, Brasil, 215-224. DOI: https://doi.org/10.5753/sbiagro.2021.18393. (In Portuguese)
+### Events
+Monique Oliveira and Luiz Rodrigues. Data assimilation in crop models: old experiences in new contexts. In: Anais do XIV Congresso Brasileiro de Agroinformática, novembro 10, 2023, Natal/RN. Porto Alegre: Sociedade Brasileira de Computação. https://doi.org/10.5753/sbiagro.2023.26539. 
 
+Monique Oliveira and Luiz Rodrigues. 2021. Monitoramento de plantas em casas de vegetação para assimilação de dados. In: Anais do XIII Congresso Brasileiro de Agroinformática, novembro 10, 2021, Evento Online, Brasil. Porto Alegre: Sociedade Brasileira de Computação, Brasil, 215-224. https://doi.org/10.5753/sbiagro.2021.18393. (In Portuguese)
+
+### Thesis
 OLIVEIRA, Monique Pires Gravina de. Leveraging data assimilation and monitoring data for improvement of crop growth estimates in protected environments. 2022. Ph.D. Thesis - Universidade Estadual de Campinas, Faculdade de Engenharia Agrícola, Campinas, SP. [Link](https://hdl.handle.net/20.500.12733/4792)
 
-## Preprints
+### Preprints
+Oliveira, Monique and Zorzeto-Cesar, Thais Queiroz and Nóia Júnior, Rogério and Wallach, Daniel and Asseng, Senthold and Rodrigues, Luiz Henrique Antunes, Uncertainty in Greenhouse Tomato Models. Available at SSRN: https://ssrn.com/abstract=4768703 or http://dx.doi.org/10.2139/ssrn.4768703 
+
 Oliveira, M. P. G. de, Zorzeto-Cesar, T. Q., Attux, R. R. de F., & Rodrigues, L. H. A. (2024). Kalman Filters in crop models: old experiences in new contexts. v1. In SciELO Preprints. https://doi.org/10.1590/SciELOPreprints.8033
 
 Oliveira, M., Zorzeto-Cesar, T., Attux, R., & Rodrigues, L. H. (2023). Leveraging data from plant monitoring into crop models. v1. In SciELO Preprints. https://doi.org/10.1590/SciELOPreprints.7663
 
-Oliveira, M., Amaro, R., Pescarini, H., & Rodrigues, L. H. (2023). Dataset of tomato plants growth observations obtained from multiple sources in a production-like setting. v1. In SciELO Preprints. https://doi.org/10.1590/SciELOPreprints.7667
+Oliveira, M., Amaro, R., Pescarini, H., & Rodrigues, L. H. (2024). Tomato plants’ growth observations obtained from multiple sources in a production-like setting. v2. In SciELO Preprints. https://doi.org/10.1590/SciELOPreprints.7667 https://doi.org/10.1590/SciELOPreprints.7667
 
 ## Versions
+V.04.0: Version used for:
+  10.1016/j.compag.2024.109324
+  Manuscripts revision
+  [Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.4.0)
+  Update reason: revision process
+
 V0.3.0: Version used for:
-    10.5753/sbiagro.2023.26539 (Conference paper and presentation)
-    Manuscript submission, preprints v1
-    [Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.3.0)
-    Update reason: changes in plots for manuscript submission, improvement in artificial data assimilation
+  10.5753/sbiagro.2023.26539 (Conference paper and presentation)
+  Manuscript submission, preprints v1
+  [Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.3.0)
+  Update reason: changes in plots for manuscript submission, improvement in artificial data assimilation
 
 V0.2.0: Version used for:
-    Manuscript submission
-    [Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.2.0)
-    Update reason: revisited some aspects of artificial data creation and scripts related to publications.
+  Manuscript submission
+  [Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.2.0)
+  Update reason: revisited some aspects of artificial data creation and scripts related to publications.
 
 V0.1.1: Version used for:
-    10.1590/1809-4430-Eng.Agric.v43n2e20220170/2023 (Journal article) 
-    Manuscript submission
-    [Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.1.1)
-    Update reason: inclusion of script related to the publication results
+  10.1590/1809-4430-Eng.Agric.v43n2e20220170/2023 (Journal article) 
+  Manuscript submission
+  [Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.1.1)
+  Update reason: inclusion of script related to the publication results
 
 V0.1.0: Version used for:
-    10.5753/sbiagro.2021.18393 (Conference paper)
-    20.500.12733/4792 (Thesis)
-[Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.1.0)
+  10.5753/sbiagro.2021.18393 (Conference paper)
+  20.500.12733/4792 (Thesis)
+  [Tag](https://github.com/mnqoliveira/data-assimilation-tomato-models/releases/tag/v0.1.0)