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mobility-team / mobility Public

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Revert "Utilisation de micromamba pour installer et tester le package"#112

Closed

FlxPo wants to merge 238 commits intomainmobility-team/mobility:mainfrom revert-102-gh-action-install-with-micromambamobility-team/mobility:revert-102-gh-action-install-with-micromambaCopy head branch name to clipboard

Conversation Commits238 (238)Checks Files changed

Commits

Commits on May 2, 2024

add openpyxl
FlxPo
committed
Create install-and-test.yml
FlxPo
committed
add presentation
FlxPo
committed
add quickstart + definitions
FlxPo
committed
add quickstart + definitions docs
FlxPo
committed
functions to build transport zones from a city id
FlxPo
committed
add a function to download osm regional extracts from geofabrik, crop them to match the transport zones boundary, extract only relevant ways for a given mode, merge the cropped and filtered files
FlxPo
committed
refactor: download_file function + use of env variables for configuration (data folders, proxy url, ...) + integration of dodgr
FlxPo
committed
add dodgr function to compute travel costs + add function caching mechanism
FlxPo
committed
create RScript python class + create separate R packages installations scripts called from mobility.setup + distribute a forked version of the osmdata R package as a binary to speed up OSM data par…
FlxPo
committed
remove MANIFEST.in
FlxPo
committed
update pyproject.toml
FlxPo
committed
formatting code and renaming setup tp set_params

Mind-the-Cap
authored and
FlxPo
committed
add Mamba

Mind-the-Cap
authored and
FlxPo
committed
Update tests

Mind-the-Cap
authored and
FlxPo
committed
Update Python version for tests

Mind-the-Cap
authored and
FlxPo
committed
Use micromamba shell

Mind-the-Cap
authored and
FlxPo
committed
Update python-package.yml

Mind-the-Cap
authored and
FlxPo
committed
Update python-package.yml

Mind-the-Cap
authored and
FlxPo
committed
Update test_parsers.py

Mind-the-Cap
authored and
FlxPo
committed
Update test_parsers.py

Mind-the-Cap
authored and
FlxPo
committed
throw an error if the user asks for a mode not available
FlxPo
committed
first working version of public transport travel costs calculations
FlxPo
committed
small fix
FlxPo
committed
create two distinct classes TravelCosts (car, walk, bicycle) and PublicTravelCosts (all public transport modes) + create a GTFS class to handle download / aggregation / GTFS router object preparation
FlxPo
committed
test another strategy

Mind-the-Cap
authored and
FlxPo
committed
try conda

Mind-the-Cap
authored and
FlxPo
committed
fix incomplete dodgr OSM tags filtering + download community GTFS resources (from google) + check if downloaded GTFS file is OK + add transfers / fix incoherent stop times in GTFS feeds
FlxPo
committed
convert public transport travel costs to km and h
FlxPo
committed
fix GTFS files with duplicated calendar - calendar_dates tables (example Marseille) + start implementing the population / trip localizer functionnality
FlxPo
committed
remove print
FlxPo
committed
add population generation scripts
FlxPo
committed
Update test_parsers.py

Mind-the-Cap
authored and
FlxPo
committed
Update test_parsers.py

Mind-the-Cap
authored and
FlxPo
committed
Update python-package.yml

Mind-the-Cap
authored and
FlxPo
committed
Update test_parsers.py

Mind-the-Cap
authored and
FlxPo
committed
Update trip_sampler.py

Mind-the-Cap
authored and
FlxPo
committed
Update trip_sampler.py

Mind-the-Cap
authored and
FlxPo
committed
Update .readthedocs.yaml

Mind-the-Cap
authored and
FlxPo
committed
Create requirements.txt

Mind-the-Cap
authored and
FlxPo
committed
Update .readthedocs.yaml

Mind-the-Cap
authored and
FlxPo
committed
Update python-package.yml

Mind-the-Cap
authored and
FlxPo
committed
Update test_parsers.py

Mind-the-Cap
authored and
FlxPo
committed
Create test_transport_zones

Mind-the-Cap
authored and
FlxPo
committed
Update test_ademe_base_carbone_api.py

Mind-the-Cap
authored and
FlxPo
committed
Rename test_transport_zones to test_transport_zones.py

Mind-the-Cap
authored and
FlxPo
committed
Update test_transport_zones.py

Mind-the-Cap
authored and
FlxPo
committed
Update test_transport_zones.py

Mind-the-Cap
authored and
FlxPo
committed
Update test_transport_zones.py

Mind-the-Cap
authored and
FlxPo
committed
create a Trips class to handle trip sampling and localization
FlxPo
committed
add urban unit category info in the trips sampling
FlxPo
committed
pseudo code for trip localization
FlxPo
committed
create a LocalizedTrips class + complete trip localization example
FlxPo
committed
fix cantville code for marseille in census data + break the localize_trips method into small submethods
FlxPo
committed
fix R output decoding issue + ignore corrupted GTFS zip files + fix pandas sampling error when p = 0
FlxPo
committed
fix gtfsrouter preparation bug when feeds have no calendar or no calendar dates + select automatically a date when the merged GTFS feed overlap
FlxPo
committed
Ajout school_attendance

martaducamp
authored and
FlxPo
committed
correction data/schools

martaducamp
authored and
FlxPo
committed
suppression .parquet

martaducamp
authored and
FlxPo
committed
Revert "correction data/schools"
FlxPo
committed
Revert "Ajout school_attendance"
FlxPo
committed
Revert "suppression .parquet"
FlxPo
committed
remove debugging statements
FlxPo
committed
fix pyproject.toml module location
FlxPo
committed
create dev dependencies in pyproject.toml + adapt github workflow
FlxPo
committed
fix pytest running outside of the mamba env
FlxPo
committed
call pytest directly in mamba shell
FlxPo
committed
activate bash shell
FlxPo
committed
add data folder to pyproject.toml
FlxPo
committed
pin R version in environment.yml
FlxPo
committed
remove print
FlxPo
committed
add R files to pyproject.toml to include them in the package and access them with importlib.resources
FlxPo
committed
Correct travel costs script

Mind-the-Cap
authored and
FlxPo
committed
create data and project folders if the do not already exist
FlxPo
committed
rewrite tests
FlxPo
committed
fix mobility surveys df names + cast pandas qcut intervals limits to float to avoid a warning
FlxPo
committed
add localized trips test + change test city to rodez (smaller inputs)
FlxPo
committed
cast paths to str when setting env vars
FlxPo
committed
install osmdata from cran if platform != windows
FlxPo
committed
add docstrings to MobilitySurvey / Trips
FlxPo
committed
pin R version
FlxPo
committed
fix binary / cran install logic
FlxPo
committed
fix 2
FlxPo
committed
print logs when testing
FlxPo
committed
move tests for debugging
FlxPo
committed
Switch github action to windows instead of linux
FlxPo
committed
move tests
FlxPo
committed
move tests
FlxPo
committed
print all of R's output
FlxPo
committed
print all of R's output
FlxPo
committed
unquiet R package installation
FlxPo
committed
add build arg to stringi install
FlxPo
committed
switch r packages repo
FlxPo
committed
install rtools
FlxPo
committed
fix
FlxPo
committed
separate R setup in github actions
FlxPo
committed
fix stupid naming error
FlxPo
committed
remove r-lib action useless parameter
FlxPo
committed
fix
FlxPo
committed
fix
FlxPo
committed
add osmdata to deps
FlxPo
committed
log everything
FlxPo
committed
log everything
FlxPo
committed
add log4r
FlxPo
committed
remve print
FlxPo
committed
test all
FlxPo
committed
debug
FlxPo
committed
fix wrong path to gtfs_route_types.xlsx
FlxPo
committed
try to change xlsx file path
FlxPo
committed
add full package-data path to pyproject.toml
FlxPo
committed
extract trips localization steps into different classes
FlxPo
committed
Update job_active_population.py

Mind-the-Cap
authored and
FlxPo
committed
add print to understand failing tests

Mind-the-Cap
authored and
FlxPo
committed
fix in gtfs.py

Mind-the-Cap
authored and
FlxPo
committed
Update gtfs.py

Mind-the-Cap
authored and
FlxPo
committed
extract trips localization steps into different classes
FlxPo
committed
replace get_insee_data by JobsActivePopulationDistribution class
FlxPo
committed
add logs to investigate csv not found error
FlxPo
committed
change csv path to be case sensitive
FlxPo
committed
Revert "change csv path to be case sensitive"
FlxPo
authored
Revert "add logs to investigate csv not found error"
FlxPo
authored
Revert "replace get_insee_data by JobsActivePopulationDistribution class"
FlxPo
authored
Revert "extract trips localization steps into different classes"
FlxPo
authored
Revert "Update gtfs.py"
FlxPo
authored
Revert "fix in gtfs.py"
FlxPo
authored
Revert "add print to understand failing tests"
FlxPo
authored
Revert "Update job_active_population.py"
FlxPo
authored
Revert "extract trips localization steps into different classes"
FlxPo
authored
Revert "add full package-data path to pyproject.toml"
FlxPo
authored
Revert "try to change xlsx file path"
FlxPo
authored
Revert "fix wrong path to gtfs_route_types.xlsx"
FlxPo
authored
Revert "debug"
FlxPo
authored
Revert "test all"
FlxPo
authored
Revert "remve print"
FlxPo
authored
Revert "add log4r"
FlxPo
authored
Revert "log everything"
FlxPo
authored
Revert "log everything"
FlxPo
authored
Revert "add osmdata to deps"
FlxPo
authored
Revert "fix"
FlxPo
authored
Revert "fix"
FlxPo
authored
Revert "remove r-lib action useless parameter"
FlxPo
authored
Revert "fix stupid naming error"
FlxPo
authored
Revert "separate R setup in github actions"
FlxPo
authored
Revert "fix"
FlxPo
authored
Revert "install rtools"
FlxPo
authored
Revert "switch r packages repo"
FlxPo
authored
Revert "add build arg to stringi install"
FlxPo
authored
Revert "unquiet R package installation"
FlxPo
authored
Revert "print all of R's output"
FlxPo
authored
Revert "print all of R's output"
FlxPo
authored
Revert "move tests"
FlxPo
authored
Revert "move tests"
FlxPo
authored
Revert "Switch github action to windows instead of linux"
FlxPo
authored
Revert "move tests for debugging"
FlxPo
authored
Revert "print logs when testing"
FlxPo
authored
Revert "fix 2"
FlxPo
authored
Revert "fix binary / cran install logic"
FlxPo
authored
Revert "pin R version"
FlxPo
authored
Revert "add docstrings to MobilitySurvey / Trips"
FlxPo
authored
Revert "install osmdata from cran if platform != windows"
FlxPo
authored
Revert "cast paths to str when setting env vars"
FlxPo
authored
Revert "add localized trips test + change test city to rodez (smaller inputs)"
FlxPo
authored
Revert "fix mobility surveys df names + cast pandas qcut intervals limits to float to avoid a warning"
FlxPo
authored
Revert "rewrite tests"
FlxPo
authored
Revert "create data and project folders if the do not already exist"
FlxPo
authored
Revert "Correct travel costs script"
FlxPo
authored
Revert "add R files to pyproject.toml to include them in the package and access them with importlib.resources"
FlxPo
authored
Revert "remove print"
FlxPo
authored
Revert "pin R version in environment.yml"
FlxPo
authored
Revert "add data folder to pyproject.toml"
FlxPo
authored
Revert "activate bash shell"
FlxPo
authored
Revert "call pytest directly in mamba shell"
FlxPo
authored
Revert "fix pytest running outside of the mamba env"
FlxPo
authored
Revert "create dev dependencies in pyproject.toml + adapt github workflow"
FlxPo
authored
Revert "fix pyproject.toml module location"
FlxPo
authored
Revert "remove debugging statements"
FlxPo
authored
Revert "Revert "suppression .parquet""
FlxPo
authored
Revert "Revert "Ajout school_attendance""
FlxPo
authored
Revert "Revert "correction data/schools""
FlxPo
authored
Revert "suppression .parquet"
FlxPo
authored
Revert "correction data/schools"
FlxPo
authored
Revert "Ajout school_attendance"
FlxPo
authored
Revert "fix gtfsrouter preparation bug when feeds have no calendar or no calendar dates + select automatically a date when the merged GTFS feed overlap"
FlxPo
authored
Revert "fix R output decoding issue + ignore corrupted GTFS zip files + fix pandas sampling error when p = 0"
FlxPo
authored
Revert "fix cantville code for marseille in census data + break the localize_trips method into small submethods"
FlxPo
authored
Revert "create a LocalizedTrips class + complete trip localization example"
FlxPo
authored
Revert "pseudo code for trip localization"
FlxPo
authored
Revert "add urban unit category info in the trips sampling"
FlxPo
authored
Revert "create a Trips class to handle trip sampling and localization"
FlxPo
authored
Revert "Update test_transport_zones.py"
FlxPo
authored
Revert "Update test_transport_zones.py"
FlxPo
authored
Revert "Update test_transport_zones.py"
FlxPo
authored
Revert "Rename test_transport_zones to test_transport_zones.py"
FlxPo
authored
Revert "Update test_ademe_base_carbone_api.py"
FlxPo
authored
Revert "Create test_transport_zones"
FlxPo
authored
Revert "Update test_parsers.py"
FlxPo
authored
Revert "Update python-package.yml"
FlxPo
authored
Revert "Update .readthedocs.yaml"
FlxPo
authored
Revert "Create requirements.txt"
FlxPo
authored
Revert "Update .readthedocs.yaml"
FlxPo
authored
Revert "Update trip_sampler.py"
FlxPo
authored
Revert "Update trip_sampler.py"
FlxPo
authored
Revert "Update test_parsers.py"
FlxPo
authored
Revert "Update python-package.yml"
FlxPo
authored
Revert "Update test_parsers.py"
FlxPo
authored
Revert "Update test_parsers.py"
FlxPo
authored
Revert "add population generation scripts"
FlxPo
authored
Revert "remove print"
FlxPo
authored
Revert "fix GTFS files with duplicated calendar - calendar_dates tables (example Marseille) + start implementing the population / trip localizer functionnality"
FlxPo
authored
Revert "convert public transport travel costs to km and h"
FlxPo
authored
Revert "fix incomplete dodgr OSM tags filtering + download community GTFS resources (from google) + check if downloaded GTFS file is OK + add transfers / fix incoherent stop times in GTFS feeds"
FlxPo
authored
Revert "try conda"
FlxPo
authored
Revert "test another strategy"
FlxPo
authored
Revert "create two distinct classes TravelCosts (car, walk, bicycle) and PublicTravelCosts (all public transport modes) + create a GTFS class to handle download / aggregation / GTFS router object p…
FlxPo
authored
Revert "small fix"
FlxPo
authored
Revert "first working version of public transport travel costs calculations"
FlxPo
authored
Revert "throw an error if the user asks for a mode not available"
FlxPo
authored
Revert "Update test_parsers.py"
FlxPo
authored
Revert "Update test_parsers.py"
FlxPo
authored
Revert "Update python-package.yml"
FlxPo
authored
Revert "Update python-package.yml"
FlxPo
authored
Revert "Use micromamba shell"
FlxPo
authored
Revert "Update Python version for tests"
FlxPo
authored
Revert "Update tests"
FlxPo
authored
Revert "add Mamba"
FlxPo
authored
Revert "formatting code and renaming setup tp set_params"
FlxPo
authored
Revert "update pyproject.toml"
FlxPo
authored
Revert "remove MANIFEST.in"
FlxPo
authored
Revert "create RScript python class + create separate R packages installations scripts called from mobility.setup + distribute a forked version of the osmdata R package as a binary to speed up OSM …
FlxPo
authored
Revert "add dodgr function to compute travel costs + add function caching mechanism"
FlxPo
authored
Revert "refactor: download_file function + use of env variables for configuration (data folders, proxy url, ...) + integration of dodgr"
FlxPo
authored
Revert "add a function to download osm regional extracts from geofabrik, crop them to match the transport zones boundary, extract only relevant ways for a given mode, merge the cropped and filtered…
FlxPo
authored
Revert "functions to build transport zones from a city id"
FlxPo
authored
Revert "add quickstart + definitions docs"
FlxPo
authored
Revert "add quickstart + definitions"
FlxPo
authored
Revert "add presentation"
FlxPo
authored
Revert "Create install-and-test.yml"
FlxPo
authored
Revert "add openpyxl"
FlxPo
authored

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