Merge pull request #190 from RoanKanninga/master

fix typo
molgenis · Mar 22, 2018 · 756cc94 · 756cc94
2 parents 54052b2 + 29bb758
commit 756cc94
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/protocols/GenderCheck.sh b/protocols/GenderCheck.sh
@@ -133,7 +133,7 @@ then
 	else
 		echo "ALARM ALARM"
 		echo "ALARM, ALARM, the calculated gender (${sex}) and the gender given in the samplesheet(${Gender}) are not the same!"
-		echo -e "ALARM!\n For sample ${dedupBam%%.*} the calculated gender (${sex}) and the gender given in the samplesheet(${Gender}) are not the same!" > "${logDir}/${project}/pipeline.gendercheckfailed"
+		echo -e "ALARM!\n For sample ${dedupBam%%.*} the calculated gender (${sex}) and the gender given in the samplesheet(${Gender}) are not the same!" > "${logsDir}/${project}/pipeline.gendercheckfailed"
 	fi
 fi