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Link to code sub modules in appendix
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romain-ragonnet committed Aug 14, 2023
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7 changes: 5 additions & 2 deletions docs/tex/tex_descriptions/models/sm_covid/code.tex
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Expand Up @@ -2,8 +2,11 @@ \section{Software and code used to conduct the analyses}

\subsection{Code}
The Python code and data used to perform the analyses is fully available on Github at the following link:
\href{https://github.com/monash-emu/AuTuMN}{https://github.com/monash-emu/AuTuMN}. In particular, \textcolor{red}{LIST LINKS TO SOME SUB-MODULES HERE}.

\href{https://github.com/monash-emu/AuTuMN}{https://github.com/monash-emu/AuTuMN}. In particular, the code
associated with the implementation of the model is \href{https://github.com/monash-emu/AuTuMN/blob/c6a9a3f6c81e39808dfb5383a342de2079ac8f1b/autumn/models/sm_covid2/model.py#L178-L537}{\textcolor{blue}{available here}}.
The suite of functions used to run the model, perform calibration and analyse the outputs is \href{https://github.com/monash-emu/AuTuMN/blob/master/autumn/projects/sm_covid2/common_school/runner_tools.py}{\textcolor{blue}{available here}}.
Finally, the model can be run for the included countries via an online Google Colab notebook, allowing the user to conduct their own analyses without
any local software installation requirement. \textcolor{red}{NEED TO CREATE NOTEBOOK}

\subsection{Software implementation}
\input{../../tex_descriptions/models/sm_covid/runtime.tex}
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