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Releases: morispi/HG-CoLoR

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17 Mar 10:24
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Improve graph traversal

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16 Feb 00:29
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Updates:

  • Multithread strategy replaced by a thread pool

  • The long reads are now loaded into memory (2 bits encoding) instead of being split into several individual

  • Better (faster) reverse-complement computation

  • Alignment file is now directly read and processed instead of being split into one file per long read

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15 Feb 20:41
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First HG-CoLoR release!

HG-CoLoR is a hybrid correction tool for highly noisy long reads.
It combines the alignment of short reads to the long reads with a variable-order de Bruijn graph, in order to correct uncovered long reads regions.